Pseudomonas thermotolerans DSM 14292, H165_RS0108070
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCCAGCGCTTCCTGGAGGTCTGGTCCGGCCTGCCAGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTGCAGCCGAACTTCTGGTGGCTGCTCGGC ATCATGCTGCTGTTCTCCTGGATGAGCCTGGTGGACGTGGTGCGCGCCGAATTCCTGCGCGGCCGCAACCTGGAGTACGTGCGTGCCGCCCGAGCCCTGG GCATGGGCAACGGCGCCATCATGTTCCGCCACATCCTGCCCAACGCAATGATCTCCACCATGACTTTCATGCCGTTCATCCTCACCGGCGCGATCGGCAC CCTCACCGCCCTGGACTTCCTCGGCTTCGGCCTGCCGCCCGGCGCGCCCTCGCTGGGCGAGCTGGTCGCCCAGGCCAAGGCCAACCGCCAGGCCCCCTGG CTGGGGATCACCGCCTTCCTGGTGCTCGGCGTGATGCTCAGCCTGCTGGTGTTCATCGGTGAGGCCGCCCGCGATGCCTTCGACCCGAGGAAGTGAGCCA
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| DNA Sequence for Gene |
>H165_RS0108070
ATGAACGAGAACCTCATCGAAGTACGCGACCTGGCCGTGGAGTTCGTCACCGGCGACAAGGCCCAGCGGGTGGTCGAGGGCGTCAGCTTCGACATCCGCA AGGGCGAGACCCTGGCCCTGGTCGGCGAGAGCGGCTCCGGCAAGTCGGTGACCGCGCACTCCATTCTGCGTCTGCTGCCCTACCCGCAGGCCCGCCACCC GTCCGGCAGCATCCGCTACGCCGGACAGGACCTGCTCAAGGCCGACGAGAAGACCCTGCGCACCATCCGCGGCAACCGCATCGCCATGGTCTTCCAGGAG CCGATGACCTCGCTGAACCCGCTGCACACCATCGAGAAGCAGCTCAACGAGGTGCTCGCCCTGCACAAGGGGCTGACCGGCAAGGCGGCCACCGCGCGGA CCCTGGAGCTGCTGGAGATGGTCGGCATCCCGGAGCCGGCCAAGCGCCTCAGGGCCTACCCCCACGAGCTGTCCGGCGGCCAGCGCCAGCGGGTGATGAT CGCCATGGCCCTGGCCAACGAACCGGAGCTGCTGATCGCCGACGAACCGACCACCGCCCTGGACGTCACCGTGCAGCTGAAGATCCTCCAACTGCTCAAA GATCTACAGAGTCGACTGGGCATGGCGCTGCTGCTGATCAGCCACGATCTCAACCTGGTACGCAGAATCGCCCATCGCATATGTGTCATGCAGCGCGGTC GGATCGTCGAACAGGCGTCGTGTGATGAATTGTTCCAGGCTCCGCAGCATCCCTATACCCGGGAACTGCTCGGCGCCGAGCCCAGCGGCGCCCCGGCCGA CAACCCGGCGGGCCCGCCGCTCCTGGAGGTCGACGACCTGCGCGTGTGGTTCCCGATCAAGAAGGGGCTGCTGCGCCGCACCGTCGATCACGTGAAGGCC GTGGACGGCATCCGCTTCAGCCTGCCCAAGGGCCAGACCCTGGGCCTCGTCGGCGAGAGCGGCTCCGGCAAGTCCACCCTAGGTCTGGCGATCCTCAGGC TGATCGCCAGCCGGGGTACCATCCGCTTTCAGGGCCAGGCGCTGGACGGCCTCACGCAGCGTGCCGTGCGTCCGCTGCGCCGGCAGATGCAGGTGGTCTT CCAGGACCCCTACGGCAGCCTGAGTCCGCGCATGTCGGTCGGCCAGATCGTCGGCGAGGGGCTGGAAGTGCACCGCATCGGGAACGAGGCGGAGCGGGAA CGAATGATCATCGACGCACTCAAGGAGGTAGGGCTGGATCCGGAAACCCGGCACCGCTACCCCCACGAGTTTTCCGGTGGGCAGCGGCAGCGTATTGCCA TTGCCCGGGCCTTGGTCCTAAAGCCGGAGCTGATCCTGCTGGACGAGCCGACTTCCGCGCTCGACCGGACGGTCCAGCGCCAGGTTGTAGAGCTGCTACG TTCGTTGCAGGCCAAGTACAACCTGACCTACCTGTTCATCAGCCATGATCTGGCGGTGGTCAAGGCGCTCAGTCACCAGTTGATGGTGATGCGTCACGGT CAGGTGGTCGAACAAGGCCCGGCGGAAGAGATCTTCTCCGCCCCGCAACACCCTTACACACAGCAGTTGCTGGAAGCCTCCTTCTTGGCTCCCGCGACTG TCGATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCAGAAGAGGAAGAAGACATGGGTTTTCTCGCCGGTAAGCGCGTCCTGATCGTGGGTGTCGCCAGTAAACTGTCCATCGCGTCCGGCATCGCCGCCGCCA TGCACCGCGAGGGCGCGCAACTTGCCTTCACCTATCAGAACGACAAGCTCAAGGGCCGCGTCGAGGAGTTCGCCGCCGGCTGGGGTTCCAGCGCCGACCT GTGCTTCCCCTGCGACGTGGCCAGCGACGAGGACATTGCCAAAGTGTTCGAGGAGCTGGGCAAGCGCTGGGACGGTCTGGACTGCATCGTGCACTCCGTG GGCTACGCCCCGGGCGACCAATTGAATGGCGACTTCACCACCGTCACCACCCGCGAGGGCTTCCGCATCGCCCACGACATCAGCGCCTACAGCTTCGTGG CCCTGGCCAAGGCCGGCCGCGAGATGATGCAGGGCCGCAACGGTAGCCTGCTGACCCTCTCCTACCTGGGCGCCGAGCGCACCATGCCCAACTACAACGT
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| Amino Acid Sequence |
>microcin C ABC transporter ATP-binding protein YejF
MNENLIEVRDLAVEFVTGDKAQRVVEGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPQARHPSGSIRYAGQDLLKADEKTLRTIRGNRIAMVFQE PMTSLNPLHTIEKQLNEVLALHKGLTGKAATARTLELLEMVGIPEPAKRLRAYPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILQLLK DLQSRLGMALLLISHDLNLVRRIAHRICVMQRGRIVEQASCDELFQAPQHPYTRELLGAEPSGAPADNPAGPPLLEVDDLRVWFPIKKGLLRRTVDHVKA VDGIRFSLPKGQTLGLVGESGSGKSTLGLAILRLIASRGTIRFQGQALDGLTQRAVRPLRRQMQVVFQDPYGSLSPRMSVGQIVGEGLEVHRIGNEAERE RMIIDALKEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPELILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVKALSHQLMVMRHG QVVEQGPAEEIFSAPQHPYTQQLLEASFLAPATVD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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