Pseudomonas thermotolerans DSM 14292, H165_RS0107640

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCCGGCTTCAATTCAATGACTGTGTTGCACTCAGTTTCTGCATCCGCCTCTACTATTGTCCTTCGGGTCCGTGTTTTGACACTCCGACCTCGAATACAA GCAACTGGGGATATTTAAGG
DNA Sequence for Gene
>H165_RS0107640
ATGAAAGTGAAAAACACCTTAGGCGTTGTCGTAGGTTCACTGATCGGAAGTCTTTCCCTCAGCGCACTGGCCCAAGGCCAAGGTGCAGTCGAGGCGGAAA TTTTCGGTAAGCGCTACTTCGAGGACAGCACTCGCGATTTCGATGAAGGCAACTTGCTGGGGGGATCTATCGGATACTTCCTGACCGAAGATCTGTCCGT GTCGTTGTCCTATGGCGAGTATCACGATCTTCGCGGCGACAGCACCAACAAGAACATCAAGGGCAGTTCCACCGGCCTGGACCTGGTCTATCACTTCGGC GAGCCGGGACCGGGCCTGCGTCCCTATCTGTCCGGCGGCCTGGCGCACCAGAGCATCGGCCAGGACGTGCGCAGCGGACGTGACCACACTACCCAGGGCG TGATCGGCGCCGGCCTGAAGTACTACTTCACCGAGCACTTCTTCGCCCGTGCGGGCGTCGACGGTCTGTACAACTTCGACCGTGGCGACAGCGAATGGAT GGCCGGCGTTGGGGTCGGCGTGAACTTCGGCGGCGCCAAGCCGGTCGCCCCGGTGATGGCCGAACCCGAGCCGATCCCGGAGCCGGAACCGCAGCCGGAA CCGCCGCAGACCGTGCGCGTCGAGCTGGACGTGAAGTTCGACTTCGACAAGTCGGTGGTGAAGGAAGAAAGCTACGGCGACATCAAGAACCTGGCCGACT TCATGAACCAGTACCCGCAGACCACCACCGTGGTGGAAGGCCACACCGACTCCGTGGGTACCGACGCCTACAACCAGAAGCTCTCGGAACGCCGCGCCAA CGCGGTGCGTGACGTGCTGGTCAACCAGTACGGCGTAAGCCCGGAGCGGGTGGACTCGGTAGGCTATGGCGAGTCCCGTCCGGTGGCGGACAATGCTACT CCGGAAGGTCGGGCGATCAACCGCCGCGTGGAGGCGGCCGTGGAAGCCCAGGTCCAGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGGACTGCCGACGAGGAGAACCCGGCCTTGGCCGGGTTTTTCTTCGCCTGCCTTTTCCCTCACCCCGGTAGCTCTCCCGGCGAGGGGGTACGTTCCCCG ATACTCTAGCGGCAGCTCGCCGAGGAGAATGGCAAGCGGCACCCGGAAGCATCAGGCACTGCATGCCAGCAGAGCCTCGCGGGCGGCGGCCACCTCGCCG ATCACCAGGATCGCCGGGCTCTTCAGGGCGAAGCGCGCGGCGTCCTGACGCATGCGGGCCAGGCTGCTGCGGCATTCGCGCTGCTGCGGCAGCGAGGCGT TCTCGATCATCGCCACCGGCATGTCGGCGCGCATGCCGCCGGCCAGCAAGCTGTCGCGTACCTCGCCGAGCTTGGCCACGCCCATGTAGACCACCAGGGT GGTGCCGCCTTTGGCCAGGGCCGCCCAGTCCAGGCTGCTGTCGTCCTGGGTGTGGGCGGTGACCAGGGTCACCCCGCGGGCGATGCCGCGCAGGGTCAGG
Amino Acid Sequence
>porin
MKVKNTLGVVVGSLIGSLSLSALAQGQGAVEAEIFGKRYFEDSTRDFDEGNLLGGSIGYFLTEDLSVSLSYGEYHDLRGDSTNKNIKGSSTGLDLVYHFG EPGPGLRPYLSGGLAHQSIGQDVRSGRDHTTQGVIGAGLKYYFTEHFFARAGVDGLYNFDRGDSEWMAGVGVGVNFGGAKPVAPVMAEPEPIPEPEPQPE PPQTVRVELDVKFDFDKSVVKEESYGDIKNLADFMNQYPQTTTVVEGHTDSVGTDAYNQKLSERRANAVRDVLVNQYGVSPERVDSVGYGESRPVADNAT PEGRAINRRVEAAVEAQVQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site