Strain | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00003.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGCGCTACTACAACGTGATCTACGACATCATCGATGACGTCAAGAAAGCGTTGACCGGCATGCTGGGCAGCGATGTGCGCGAGAACATTCTCGGCGTCG CCGAGGTGCGCGACGTGTTCCGTTCGCCGAAGTTCGGCGCTATCGCCGGCTGCATGGTGATCGAGGGTACCGTCTACCGCAATCGCCCGATCCGCGTGCT GCGCGACGACGTGGTGATCTTCGAGGGCGAGCTGGAGTCACTGCGCCGATTCAAGGACGACGTCGCCGAAGTGCGTAGCGGCATGGAGTGCGGCATCGGC GTGAAGAGCTACAACGACGTCCAGGTCGGCGACAAGATTGAGGTCTACGAGAAGGTTCAGGTCGCGCGTTCGCTCTGACGCCTGGAGGCAGACAGCAAGC GGCAAGCTCCATGGGATGGCCTGGCCATCGACTGGGCTTGCCGTTTGGTTTTGCAGTTTGATGATTTTCTGAGCTGCCCCGTGCGGCTCGAGGCAGAGTT
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DNA Sequence for Gene |
>H165_RS0103150
ATGGCCAAAGACTACAGTCGTACCCAGCGGCTCGGCGACCAGATGCAGCGAGAGCTCTCCGAGCTGATCCGCCGCGAGGTCAAGGATCCGCGCCTGGGCA TGATCACCATCACCGGGGTCGAGGTGACCCGCGACCTGGGCCACGCCAAGGTGTTCATCACCGTGATGGGCGCCGATGGCGGCGAGGTGGTCGAGCGCAA CCTGGAGATCCTCCGGGATGCCGCCGGCTACCTGCGCATGCTCCTGGGCAAGGTGATGAAGGTGCGCAGCGTGCCCCAGCTGCATTTCCACTATGACGAA AGCATCGCCCGCGGCGCCCACCTGTCGGCGCTGATCGATCGCGCCGTGGCGGAAGACAACAAGCATCGGGATAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGTGGCGCAGGTCAAACGTATCCGCCGCAATGTCAGCGGCATCATCGTCCTCGACAAGCCCCGGGGATTCACCTCCAACGCCGCGCTGCAGAAGGTCCG CTGGCTGTTGAATGCCGAGAAGGCCGGGCACACCGGCAGCCTCGATCCGTTGGCCACCGGCGTCCTGCCGCTTTGCTTCGGCGAGGCGACCAAGTTCTCC CAGTACCTGCTGGACGCCGACAAGGGTTACGAGACCCTGGTGCAGCTGGGGGTGACCACCACCACTGGGGATGCCGAGGGTGAGGTCGTCGAGCGCCGCG AAGTGACCGTTGGTCGCCCTGAGCTGGAGGCGGCCCTGGAGAAATTCCGCGGGGAAATCAAGCAGATACCGCCGATGTATTCGGCTCTCAAGCGCGACGG CCAGCCGCTCTACAAGCTGGCGCGGGCCGGCGAGGTAGTGGAGCGCGAGGCGCGTTCTGTTACTATTAATCGCTTGGAATTGCTGTCCTTCGAAGGGACC
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Amino Acid Sequence |
>ribosome-binding factor A
MAKDYSRTQRLGDQMQRELSELIRREVKDPRLGMITITGVEVTRDLGHAKVFITVMGADGGEVVERNLEILRDAAGYLRMLLGKVMKVRSVPQLHFHYDE SIARGAHLSALIDRAVAEDNKHRDN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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