Pseudomonas thermotolerans DSM 14292, H165_RS0100885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGTGCGCACCTGAGCAGCGCAGCTGCGAGCACAGCGACTACGCGGGGCAGGGCGCTACTCCGCTGCCGGCCGCGCCGGCCTGGCGCCCATCTTCCACCA GCAAATCCTGCACTCTGCGGATAACCGCCGCCGTCACGGGAGTGAGGGGCAGGGGCCGGCAGGCCCTGCGCGAGCGCTACCAGGATCTCTTCGAGCAGTA CCAAGTGGACGCCCTGATCTTCCCCACCACCTGCGTGGTGGCGCCTCTGGCCAACGAGGAGGTCAACCTGCCGAGCAACTTCGCGCGTCTGATCCAGAAC ACCGAGCCGTCGGCCAGCGCCGGTCTGCCCGGCATCCAGCTTCCCATAGGGCTGGGTAGCCGTTCGGGGCTGCCGGTGGGCATCGAGCTGGATGGTCCGG CCTGGAGCGACCGCCGCCTGCTGGCCATCGGCCAGGCCCTGGAAAGCATCTTCGGGCGCATCCCCCGCGCCTGATTCACCGAACGGAAACGAGAGAAGCC
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| DNA Sequence for Gene |
>H165_RS0100885
ATGAGTCAGAACCAATACTGGCAGGACAAGGTGGTCATAGTCACCGGCGGGGCCAGCGGCATGGGGCGCGATGTTTGCCTCACCCTGGCCGCCCGGGGCG CCCGAGTGGTCATTGGCAACCGCAGCGCCGCAGCCGGCGAGGCCCTGCTGGCGGAGATCCGCGCCGCCGGCGGCCAGGCCCTGTTCCGCAGCACCGACGT GTCCCGCGCGGCGGATTGCGAGGCCCTGGTGGCCCTGGCCATGGACAGCTACGGGCGCCTCGACGGGGCCTTCAACAACGCCGGGCTGCAGCGCGCCTTC AACCCGATCCATGCCACACCGGATGCCGACCTCAGCGAGGTGATCGATATCAACCTCAAGGGCGTGCTGTACATGATGAAGTACGAGGCGGCCGCCATGC TCAGGAACGGCGGCGGAGCGATCGTCAACAACGCCTCCATCTTCGGTCTCAAGGCCATGCCCGAGACTGCCTACTACGTGGCTTCCAAGCACGGCATCGT CGGTGCCACCCGGGCTGCCGCGCTGGACTACGCCACCCAGGGTATCCGTGTGAATGCCGTCTGCCCCGGGCCGATCAAGACCCCCAGCTACGACCGTGTC ACCGGCGGTGACGACCACATGTACGACGACGGGGTGCCCATGCACCGCATCGGCCAGCCCCGCGAGGTCACCGAAGCCGTGCTCTGGCTGCTCTCCGACC AGGCCTCCTATGTCACCGGCAGCGCCCTGTCGGTGGATGGCGGCATGGTCGCCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCGGCAGGCAATGGAGAACAAGAAATGATCAAAGCACTCAGCTATGTGGTGGTGGAAACCCCGCATTTGGAAGCCTGGATGGAGCAGGCCGAGAAGCA TATCGGTCTGCAGGTCGAGGTGGTGGAAGCCGGCCGGTGCGTGCGCCTGCGCGCCGACGAGAAGTTCCAGCGCCTGCTGGTCACCCGCACCGAGGGCCAG GCCAGCATGGGCATGGGCTTCGAGCTGGATAACGCCGAACAGCTGCAGACCATCCGCCAGCGTCTGGAAGAGGCGGGCTACGCCACCACCGAGGGCACTG CCGAAGAGCTGGCCCTGCGCGGAGTGGCCGGGATGATCCACTTCCGCGATCCGGACGGCGTGCGCCTCGAGGTCTGCCATGGCCTCGCCGATGCCGCCAC CCCCTTCGTGCCGGGTCGCCCCCTGGGCGGCTTCCGCACCGGCGACATGGGCATAGGCCACGTGGCACTGATCACCGATGAGGGGGTAAAGATTAGAGGC
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| Amino Acid Sequence |
>short-chain dehydrogenase
MSQNQYWQDKVVIVTGGASGMGRDVCLTLAARGARVVIGNRSAAAGEALLAEIRAAGGQALFRSTDVSRAADCEALVALAMDSYGRLDGAFNNAGLQRAF NPIHATPDADLSEVIDINLKGVLYMMKYEAAAMLRNGGGAIVNNASIFGLKAMPETAYYVASKHGIVGATRAAALDYATQGIRVNAVCPGPIKTPSYDRV TGGDDHMYDDGVPMHRIGQPREVTEAVLWLLSDQASYVTGSALSVDGGMVAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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