Strain | Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00014.14_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCCAGCGAGGGCTCAACGGCTGGACGAGGCTGGGCTGAGCATTTCGATGGACTGGATATCGAAATCGGTTTCCAGGTACTCCGAGCGTTGCTCGTGGA AGGTGACCATGTGCGGTTTTTTCAGGTGCTCCTGGAAGTCGGCCTCACTGGCCCACACCTCGAAGAACACGAACAGGCTCGGGTCTGTCTTGTCGCGCAG CATGTGGTACTCGACACAGCCTTTCTCGGCGCGGCTCGATTGCACGGCGGCGCGGAACAGCAGTTCGAAGGCGTCGGCTTTTTCCGCGCGGGTCTTGGCC TTGAGAATGAACGCGTAGGGTTCGGTCATGGTGAACGGATTCCTGAAAGTGGGAGTGACTGAGTCTATGACAACACTGGCCGGGCGATTCGTGAATTCTG CGCAACTATCATTTGCCCGCAAGCGGGTGTTTCCGCCCCCATACGCTGGGTAGTCTGCGGCCCTGTTCATTGACTGGGTCGACGACCCGTGGGGCTTTCC
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DNA Sequence for Gene |
>H618_RS0116805
ATGCAGCACATTCTGCTTCTCAACGGCGGCAAACGCTTCGCCCATTCCGACGGGCGCCTCAACCAGACCCTGCACGACGGCGCCGTGGCGTTCTTCGACC AGCCCGGCTTCGAGGTGCGCGAAACCTTCATCGATGGCGGTTACGACGTCGACGAAGAGGTGCAGAAATTTCTCTGGGCCGATGTGGTGATCTACCAGAT GCCGGGCTGGTGGATGGGCGCGCCCTACACCGTCAAGCAGTACCTCGATGAGGTGTTCACCGCAGGCCACGGCAGCCTCTACGCCAACGATGGCCGCACG CGCAGCGATGCCTCGCAGAAATACGGCAGCGGCGGCCTCATCCAGGGCAAGCGCTACATGATTTCTGCCACCTGGAACGCCCCGCAGCAGGCCTTCGATG ACCCGCACGACTTCTTCGAAGGCAAAGGCGTGGATGCGGTCTACTTCCCGTTCCACAAGGCCCATGAGTTTCTCGGCATGACCGGGCTGCCGACCTTCCT TGCGGTGGATGTCATGAAACGCCCCGATGTGCCCGCCACGCTTGCCCGCTACCAGGCGCACCTGGGCGAGGTGTTCGCACGCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AATCGATGGCTGAGGGCGAACAGGCTTGCAGCGCCGGCGATGAGCCGTTATCAATCATCGCCCACCCCCAGACAGGCCTGCCCGTTGTGAAGACGCGCTC AGAAGAACTGCAAGTATTCGTCGCGGTGATCGACTGTGGATCGATCTCCGCTGCTGCCGAGCAACTGGGGCAGACGCCGTCTTCGCTCAGCCGCAGCCTG TCGCGGCTGGAAGCACGGCTGGGCACCACCTTGCTCAACCGCACCACCCGGCGCATGGAACTGACCGAAGAGGGGCGGTTTTTCCTCGAACGCTCGCGGC TGATTCTCGGGCAGATGCAGGAGCTCGAAGAGCGCCTGTCACTGCACCGCCAGACCCCGGCCGGACGCCTGCGCATCAACGCGGCAACGTCGTTCATGCT GCACGCGATCGTGCCGTGGATCGGTGAGTTCCGCCGCCAGTACCCGGACATCGAGCTGGAGCTGAACACCGACGACCTGATCATCGACCTGCTGGAACAG
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Amino Acid Sequence |
>NADPH quinone reductase MdaB
MQHILLLNGGKRFAHSDGRLNQTLHDGAVAFFDQPGFEVRETFIDGGYDVDEEVQKFLWADVVIYQMPGWWMGAPYTVKQYLDEVFTAGHGSLYANDGRT RSDASQKYGSGGLIQGKRYMISATWNAPQQAFDDPHDFFEGKGVDAVYFPFHKAHEFLGMTGLPTFLAVDVMKRPDVPATLARYQAHLGEVFARD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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