Strain | Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00013.13_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGAAGAGCAGGCGCGCGATAACGGCCACTCGGTGAAGATTTTCGAAAGCCGCTTCCGGCCGATGAAGCTTACCCTGACCGACATTCAGGAGAAGACCCT GATGAAGCTGGTGGTCGACGCCGACAACGATCGCGTGCTGGGTTGCCACATGGTCGGGCCGGATGCCGGCGAGATCATCCAGGGGCTTGGCATTGCGCTC AAAGCCGGCGCCACCAAGCAACAATTCGACGAGACAATCGGCGTGCATCCCACTTCTGCCGAAGAATTCGTCACCCTGCGTACCCCCACCCGCTGAGCTT GCGCTCACCCGCAACAGGTCGTGCCGGTCCGGCGCGACCTGTTGGCGCAAACCGCGCCGTCATCGTCATCTCTTCTATCTATCAACCGCTTTATAGCGAA AACCAATTGCTCGAATCAGCTTTGCCAATGAGCGTTCTGCGCCTGCCTTGGATAGGATTCCCTCCGTCAACTGATTTCAACCCATCCGAGGAAACCTCTA
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DNA Sequence for Gene |
>H618_RS0116115
ATGCCTATCATCAATAGCCAGGTCAAACCGTTCAACGCCACCGCCTACCACAACGGCGAGTTCGTTCCAGTGAGCGAAGCCGACCTGCACGGCAAGTGGT CCGTGGTGTTCTTCTACCCAGCAGACTTCACCTTCGTCTGCCCCACCGAGCTGGGCGACCTGGCTGACAACTACACCGAGTTCCAGAAACTGGGCGTGGA AATCTACGGCGTGTCTACCGACACGCACTTCACCCACAAAGCCTGGCACGACACTTCCGACACCATCGGCAAGATCAAGTACCCGCTGATCGGTGACCCG ACCCACGTCATCTCGCGCAACTTCGACGTGCTGATCGAAGAGGCCGGTCTGGCGGATCGTGGCACCTTCGTGATCAACCCCGAAGGTCAGATCAAGATCG TTGAAATCAACGACGGTGGTGTAGGCCGTGACGCCAGCGAACTGCTGCGCAAGGTCAAGGCCGCCCAGTACGTTGCAGCTCACCCAGGTGAAGTCTGCCC AGCCAAGTGGAAAGAAGGCGAAGCCACTCTGGCCCCGTCGCTGGACCTGGTCGGCAAGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCCGTGAGTCGGACGCGGGCGGTGCACCACCGCCACTTCTAGTGTTGCCCCGTCCCGTTGAAGCGCCCGGGCGAACCTGCCTGGGCGTTTTCATTTACA GCGTGTGAACTTACTACCGAGTCAATAAAGGAAACGCCCGTATGTTGGACGCCACCCTCAAATCGCAACTCAACACTTATCTGCAGCGAGTCAGCCAGCC GATCGAGATCGTTGCGTCCCTCGACGACGGCGCAAAATCCCGCGAACTTCACGACCTGCTGGTGGAAATCGCCAGCCTGTCCGAGCTGATCACGCTGCGC GCAGACGGCGAAGATGCCCGTCGCCCATCGTTCTCGCTCAATCGCCCCGGGGCTGACATCGGCCTGCGCTTTGCCGGTATCCCCATGGGCCATGAATTCA CCTCCCTGGTGCTGGCGCTGCTGCAAGTAGGCGGCCATCCCTCCAAGGCCGGTGCCGAACTGATCGAACAGATTCAGGGGCTGGAGGGTGATTTCGTCTT
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Amino Acid Sequence |
>alkyl hydroperoxide reductase
MPIINSQVKPFNATAYHNGEFVPVSEADLHGKWSVVFFYPADFTFVCPTELGDLADNYTEFQKLGVEIYGVSTDTHFTHKAWHDTSDTIGKIKYPLIGDP THVISRNFDVLIEEAGLADRGTFVINPEGQIKIVEINDGGVGRDASELLRKVKAAQYVAAHPGEVCPAKWKEGEATLAPSLDLVGKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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