Pseudomonas cremoricolorata DSM 17059, H618_RS0115040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTTCGAGATGCTTTTGCTCGAAGGGTTCCAGGCGGGCTTGTCGTGGATCACCGTGCTGCGCAAACGCGAGCGCTATCGCGAGGTGCTGTATGGCTTCGAC CCGGTACGACTGGCGCAGATGAGCGATGAACGCATCGAGGAACTGATGCTCGACCCCGGCATCATTCGCAACCGCCTCAAGCTCAACGCCGTGCGCCGCA ACGCCCGGGCCTGGCTGGCGCTGGACAACCCGGCCGAGTGGCTGTGGTCGTTCGTCGGCGGCGAGCCGAAAATCAATCACTTCACCGGGCGCAGCGACAT TCCGGTGAGCACCGACGAGGCCGTGGCCATGAGCAAGGCCATGAAGAAGGCCGGTTTCACCTTCGTCGGCCCGACCATCTGCTACGCCTTCATGCAGGCG ACCGGCATGGTCATGGACCACACCACCGATTGTGATCGCTACGCCGCGCTGGTGCGCTGACGGGTACAATGCGCGGCTTGCAGCTAGAAGGAATGCACCT
|
|
| DNA Sequence for Gene |
>H618_RS0115040
GTGGAAAAATTCAAAGGCGCCCTGATGGTCGGGGCGCTGCGCCTGTTCGCCAAGCTTCCGTGGTGTGCGGTGCAGCGTGTCGGCGCCGGCATCGGTTGGC TGATGTGGAAGTTGCCCAATGGTTCGCGCAAGGTGGTGCGAATCAACTTGGCCAAGTGCTTTCCGGAGATGAACCCCGCCGAGCGCGAGCAACTGGTGGG ACGTGCCCTGCAGGACATCGCCAAGTCGTTCGTGGAAAGCGCCTGTGCGTGGATCTGGCCGCCGCAGCGCTCGATCGATCTGGTCAAGGAGGTCGAAGGC CTTGAGGTGTTGCAGGAGGCGTTGGCCTCGGGCAAAGGCGTGGTCGGTATCACCAGCCATCTGGGCAACTGGGAAGTGCTCAATCACTTCTATTGCAACC AGTGCAAGCCGATCATCTTCTATCGCCCGCCCAAGCTCAAAGCGGTGGACGACCTGCTGCGCGAGCAACGGGTGCAGATGGGCAACCGTGTGGCGCCGTC GACCAAGGAAGGCATTCTCAGCATCATCAAGGAAGTGCGCCGGGGTGGTCAGGTGGGGATTCCGGCCGACCCTGAGCCGGCGGAATCGGCCGGGGTGTTC GTGCCCTTCCTCGGTACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTCGCCGGCGGCAAGGCGGTCGGGGTGTTCCTGCATGCCGTGCGGCTGC CCGACGGCTCGGGTTTTCGCGCCATCATCGAGGCGGCGCCGGAAGCGATGTACAGCCTTGATGTGACCGAATCGGCGGCGGCCATGAGCAAGGTGGTCGA GCGTTATGTGCGGGCCTATCCGAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAAACGTCCGGCCGGTGAAGACCGCTGGTACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTGATGTATGAGCGCGGGAGCGCCGGACCGCCTGACCGCCGGAGCGCTCGCCCCTACAGGGGTTTGAGTTTCTTTAGGAAGACAGTCATCTCTTTCTCGG CCTGTTTGTCGCCGTGGGCCTGGGCGGCAGTGATGCCTTGCTGCCAGGCGCTACGTGCGGCGGTCGGGTCGCCTGCCAGCTGGTGAGCCTTGCCCAGCAG CTTCCAGGCGGCCGAATACTTCGGGTCCTGCTCGACGCAGCGCGCCAGGTGCACCGCGGCCTCGGCGCCGTGTCCTTCGTCGAGCCAGGCCTTGCCCAGG CCGAAGCGCAGCAGCGGGTTATCCACACCCTTGGCCAGCATTTTTTCCAACGACTCGCGCATGGCTGTTCTCCCTAGAAGAAACTCAGGCCGACGTGGAA CAGTTTCTCCACGTCGCGAATGTGCTTTTTATCCACAACGAACAGAATCACGTGGTCGCCACTTTCGATCACCGTCACGTCGTGGGCGATCAGTACCTGC
|
|
| Amino Acid Sequence |
>lipid A biosynthesis lauroyl acyltransferase
MEKFKGALMVGALRLFAKLPWCAVQRVGAGIGWLMWKLPNGSRKVVRINLAKCFPEMNPAEREQLVGRALQDIAKSFVESACAWIWPPQRSIDLVKEVEG LEVLQEALASGKGVVGITSHLGNWEVLNHFYCNQCKPIIFYRPPKLKAVDDLLREQRVQMGNRVAPSTKEGILSIIKEVRRGGQVGIPADPEPAESAGVF VPFLGTQALTSKFVPNMLAGGKAVGVFLHAVRLPDGSGFRAIIEAAPEAMYSLDVTESAAAMSKVVERYVRAYPSQYMWSMKRFKKRPAGEDRWY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|