Pseudomonas cremoricolorata DSM 17059, H618_RS0115005

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACCGCTGCCCGGCAATTTCCCGCGGCGTAATCGCATCATCAGCGGGCTGTCGCTGGGCGTGCTGGTGGTCGAGGCAGGCCTTGCCAGCGGATCGCTGAT CACCGCACGCCTGGCCGCCGAGCAGGGCCGCGAGGTGTATGCCATCCCCGGCTCGATCCACCATCCGGGGTCCAAGGGTTGTCATCAGCTGATCCGCGAT GGCGCCTTGCTGGTGGAAAACGTCGAGCAGATTCTCGACAGTCTGCGCGGTTGGCAGAACGTCAGCCCGGCACCGACCACCACCGCGCCCAACGAGCATC CCCTGCTGGCCCTGCTGCACGCCGCGCCGCACACCAGTGAAGGCCTGGCCTTGAGCAGCGGTCTGGCGCTGAGCGATGTACTGGCGGCGCTGACCGAACT TGAGCTCGAAGGCAGAGTTACCTGCGCAGCCGGACGTTGGTTTGCAAGGTCGGCCTAAGTACACTGCTCGCACGCAAGATTTCCAGGTGGAGAAACGAAC
DNA Sequence for Gene
>H618_RS0115005
ATGGTGAGCAGTTTTCGTGTGCAACAGGCCGCACGTGAGATCCGGGCAGGTGCAGTCATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGATC CGTGGAACGAAGAGGCGGTGTACCGTCTGCTGGCGCTCAAATCACGGCCTGTGGACAAAGGCCTGATCCTGATCGCCGACAACATCCGGCAATTCGACTT CCTCTTCGAGGATTTCCCCGAGGACTGGATCGACCGCATGAGCGCAACCTGGCCGGGGCCCAATACCTGGCTGGTACCGCATCAGGATCTGTTGCCCGAG TGGATCACCGGCGAGCACGACAGCGTCGCCCTGCGCGTCAGCGATCATCCGCAGGTGCGCGAGCTGTGCGCGCTGGTAGGCCCTTTGATTTCCACCTCCG CCAATCCTGCCGGCCGACCCGCCGCCAAGACACGGCTGCGGGTCGAGCAATATTTCCACGGTGAGCTGGATCATGTGCTGGGCGGGGCACTGGGCGGGCG CAAGAACCCCAGTGTGATTCGTGACTTGGCGACAGGGCAAATCGTACGTCCCGGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGACAAAGCTGGTAATTCCAAACGCTCATCAGGCGAGTCAACGCCAAGCGACTCTTGATTGGTTTTGGGCCCGTGTTCCATTTTTCTATGCTGCGAACTG CTGCCGAGCAATTGAAATTGTGCACTCATCCCGGTGCAATGGCGTCTTAGGCTCTGTATGAAAAGTCCTGAGACGCCGCGAGACAAGGCCAATGGCGCCC CCAGCTAGGCGCCCCCAGCTATTTTCAACGCAGGATCAGCAAGTATCAGGGCTTTCAGACAGAGCCTAGCAATCTCAAAGAGCACACAGAGGACATGGAG GCACAGCCGAGTACCCACAAACGACAGAGTACTGAAACCAGCAAGTAGATTTTCGAAAAATATAATTATTTAAAGATGTGTGAACTTAGGTACTTCATCG TCAGAAATTTCGTAATTTCAAGAATTGTAATATTCTGAATTTACAAGTTTTTAATTTTTATTGTCGTTAAATCGCGCACCATTTAGGGTTGTGGGGCTGC
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVSSFRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVYRLLALKSRPVDKGLILIADNIRQFDFLFEDFPEDWIDRMSATWPGPNTWLVPHQDLLPE WITGEHDSVALRVSDHPQVRELCALVGPLISTSANPAGRPAAKTRLRVEQYFHGELDHVLGGALGGRKNPSVIRDLATGQIVRPG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site