Pseudomonas cremoricolorata DSM 17059, H618_RS0112310
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGGCCAGTTCGACGGCCTTGATGCGGCAGGTCTGATCGAAGGTGTAGCGGTTGTCCTCGGTGACCTTGCTCAACACGCTGTAGGCGCCACTGCCGTCG GTGCCGCGCACCAGTGCCTCGTAGGCGAATACCTGCTGGCGCCCCGGCGCGACGATCGGCTGGAAGGCCATGCTGAAGTCGAACGGCAGCGGCGCCTGGT CGGCGCAGCGTCGGCAGCCGACAGGGCGCGTGGCGGGTTGGGCTTCGGTCGGGCGGGTCATGACGGTTACCTCGGTGAGCGGGTCGCGGCAGGCGGTGTG AATCGGATATGCAGGTTCGACAACAGCATTGATGGCTTTACGCCAGACTGCCATGGCAGTCGTCGGCCGGGCCGCAACGCGTGCCGCACTGGGCGGCTGT GCGCGGTAAAAAAGCCTACGGCGCGGCTTGCGCCGCGCCTGCGCCGTCACTAACGTAGCGCCTTTCCCAATTGCCCCCTCGCCCTGCAGGAGCCCTTGCC
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| DNA Sequence for Gene |
>H618_RS0112310
ATGGCCGCCGCCGCCTTCGCGTCCTTTCGCCCACGTCTTACCGCCGCTGCCACGTTGCTTGGCCTGCTCGGTCTGGGCGGCTGCCAGATCGGCGTGCAAC CCGACAGCGTGCCGCCCAGCGTCGGTGTGCAAGCGCTCAAGGGCCTGGCGCAAGGCGCTTCGGTGCGGCGCAACGGCATGGGCGCGCCGCTGATCGAAAG CGCCAACTTCCATGACGCGCTGTTCAGCCTGGGCTATGTGCACAGCGTCGACCGCATCGAGCAGATGCTCGCCATGCGCCTGCTCGCGCAAGGGCGCATG ACCGAGCTGGCCGGCGCCGAGGCGCTGGACATCGACCGACTGATGCGTGCGGTCAACCTCAGACAAAGCGCCGGTCAGCTGTACGCCGCGGCCTCGCCGC GCGTGCAGCGTTTCTTCGAGGTCTACGCCCGCGGCGTCAACGCCTATCTGTTCCGTTATCGCAACAGCCTGCCGGGCGGGCTGGCCCAGGGTAATCAGCA GGTCGAGTACTGGAAGCCCGAGGATTCGGCGCTGATCTTCAGCCTGTATGCCTTCAGCCAGTCGGTGAACCTGCAGGAAGAACTCTCGGCGCTGACCCTG GCCCGCCAGGTGGGCAGCGACAAGCTGCCCTGGTTGCTGCCGGTGGCCGCCGATGAGCCCCTGGCCGAGGCGGAAGCGGGGAAACTCAAGGGCCTCAACC TGGACGACCAGTTGCCGGGCTTCACCGCGCTGGCGGCGGCCGCGCAGAAGCTGGCCGACCTCGATCTGCTCGGCAGCCCGGGCTCGGCCAACCTGGCCAT CGCGCCGCAGCGCAGCCGCAGTGGCAAGAGCCTGTTGGCCAGCGACAGCCGCGCGGCCTGGGCCTTGAGCCCGGTGCAGGTGCACACCAGCAAGTACCAG GTGGCCGGGCTGTCGCTGCCGGGCCTGCCGTTGTTGCTGGCCGGGTACAACGGCAAGCTGGCCTGGAGCAGCAGCGCGGTGATGGCCGACAACCAGGACC TGTTCCTCGAACAGGTGCGCCGCCAGGGCAATCAGCTGACCTACCTGGCCGACGGCAAGTGGCTGCCGGCACGCGCGCGCAACGAGACCTTCTTCGTCAA AGGCGAGCGCCCAGTGCGCGAGGTGCTGTACGACACCCGCCATGGCACCTTGCTCGGCCAGCCGGGCAGCAATGGCCTGGCCCTGGCGCTGTACCTGCCG TCGCTCAAGGACGACCGCAGCCTCGATGCGCTGTTCGACCTGACCCGCGCCAGCTCGGTGGAAAAAGCCTTCGACAGCACCCGCGAAGTGGCTGCCGCCG CGCTCAACTTCGTCTTCGCCGAACCGCAGCACATCGCCTGGCAGGTCAGTGGCCGCTACCCCAATCGCCGTGAAGGCCAGGGCCTGCTGCCTTCGCCTGG CTGGGACGGGCGCTACGACTGGGATGGCTATGCCGACCCGATGCTGCACCCCTACGACCAGGACCCGACCGCCGGCTGGATCGCCCATGCCAACCAGCGC AGTCAGCCCAAAGGCTATGGCATGCAGCTGTCGAGCACCTGGTACTACCCCGAGCGCGCCGAGCGCCTTGGCCAACTGGCCAGCAGCGGTCGCTTCGATG CGCGCAGCCTGAACCTGTTGTTCAACGACGCGGTAACGCCGCTTGCCGACAAGCTCAAACGCATGTTCGAAGCCCCCGGCATGGCCCAGCCGCTGCAACA GGCGATCAACGCCCTGCCCGCCGACCAGCGCAGCGCCGCCCGCGAAACACTGGCGCGGCTCAAGGCCTTCGACGGGCGCCTGAGCGCAGCCTCAGCCGAT GCTGCGTTGTATGAATTGTTCTTGCAGAGCGTGGCGCGGCAGACCTTCCTCGACGACCTCGGGCCAGAGTCCGGTGCCCCCTGGCAAGCGTTCGTCAGCA ATTCGCGGCTGTCGTACTCGGCGCAGATCGACCACCTGCTGGGCCGCGACGACAGCCCGTTCTGGGATGACCGCAGCACGCCGCAGAAGGAAGACAAACC GACCATCCTCGCCCGCAGTCTGGCCGCCGCGATGCAGGCGGCCACTGCGCAACTGGGCAGTGATCGCCGCGCCTGGCAGTGGGGTGCGCTGCACCAGTAC CACTGGCCGGCGCCGACCTGGCATGGCCTGGGCGACCCATTGAAACGGCCCGCCATGGCGGCCTCCGGCGACTTCAGCACCCTCGCCTTCACCCCCTACG CCATCGGCAGCCAGTTCGACACCACGCTGCCGGCCTCGGCACGGATGATCGTCGACTTCGGCCAGGTCGAGCCGCTGCAACTGATGACCAGTTCCGGGCA GTCGGGCAACCCGGCAAGCGCGCATTTCAGCGACGGCCTGGACGCCTGGTTCAAGGGCCAGATGATGAGTCTGCCCCTGCAACCGCAGCACTTCGAGCGC GCCTACGGCAAGCAGCGACTGTCGCTGGTGCCGGGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGACGATTCGGTCGAACTTCCAGCGCGGCGCGGCGCTCCCAACAGGAACTCCCTGCTCGGCGCCACCGCCATGGATCTTGTCATCGCTCGCCCCGAAG GCCTGTACTGCCCGCCAGGGACTTTCTACATCGACCCCTGGCGCCCAGTGGCACGGGCGGTCATCACCCACGGCCACGGCGACCATTCGCGCCCAGGCAA CGGCCACTACCTCACCGCCGCACCCGGCGCTGGCGTGTTGCGCAGCCGCCTGGGGCAGGACATCAACCTGCAGACCCTGCCCTACGGCGAACGCCTGGTG CACCACGGTGTGACCCTCAGCCTGCACCCGGCCGGCCACGTGCTGGGCTCGGCCCAGGTGCGCCTGGAATATCAAGGCGAGGTGTGGGTAGCCTCGGGCG ACTACAAGGTCGAACCCGACGGCACCTGCGCGCCCTTCGAGCCGGTGCGTTGCCACACCTTCATCACCGAATCGACCTTCGGCCTGCCGATCTACCGCTG
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| Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MAAAAFASFRPRLTAAATLLGLLGLGGCQIGVQPDSVPPSVGVQALKGLAQGASVRRNGMGAPLIESANFHDALFSLGYVHSVDRIEQMLAMRLLAQGRM TELAGAEALDIDRLMRAVNLRQSAGQLYAAASPRVQRFFEVYARGVNAYLFRYRNSLPGGLAQGNQQVEYWKPEDSALIFSLYAFSQSVNLQEELSALTL ARQVGSDKLPWLLPVAADEPLAEAEAGKLKGLNLDDQLPGFTALAAAAQKLADLDLLGSPGSANLAIAPQRSRSGKSLLASDSRAAWALSPVQVHTSKYQ VAGLSLPGLPLLLAGYNGKLAWSSSAVMADNQDLFLEQVRRQGNQLTYLADGKWLPARARNETFFVKGERPVREVLYDTRHGTLLGQPGSNGLALALYLP SLKDDRSLDALFDLTRASSVEKAFDSTREVAAAALNFVFAEPQHIAWQVSGRYPNRREGQGLLPSPGWDGRYDWDGYADPMLHPYDQDPTAGWIAHANQR SQPKGYGMQLSSTWYYPERAERLGQLASSGRFDARSLNLLFNDAVTPLADKLKRMFEAPGMAQPLQQAINALPADQRSAARETLARLKAFDGRLSAASAD AALYELFLQSVARQTFLDDLGPESGAPWQAFVSNSRLSYSAQIDHLLGRDDSPFWDDRSTPQKEDKPTILARSLAAAMQAATAQLGSDRRAWQWGALHQY HWPAPTWHGLGDPLKRPAMAASGDFSTLAFTPYAIGSQFDTTLPASARMIVDFGQVEPLQLMTSSGQSGNPASAHFSDGLDAWFKGQMMSLPLQPQHFER AYGKQRLSLVPGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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