Strain | Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCTGGATATGCGTTATTACAACGTGATCTACGACATCATCGAGGACGTCAAGAAAGCCCTGACCGGCATGCTCGGCAGCGATGTTCGCGAGAACATCCT GGGTGTGGCCGAAGTGCGTGACGTGTTCCGTTCGCCGAAGTTCGGCGCCATCGCTGGCTGCATGGTCATCGAGGGTACTGTGTACCGCAACCGTCCGATC CGCGTTCTGCGCGAGGACGTGGTGATCTTCGAAGGCGAGCTGGAATCGCTGCGTCGCTTCAAGGACGATGCTGCCGAAGTGCGTAACGGCATGGAGTGCG GTATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAGGTCTTCGAGAAAGTCCAGGTGGCACGTACCCTGTAAGGGTCGTGCCGGGC GCAGCCCCATCCCGTCGGGGATGGCCGCGCCTCACAAGGTAACGCCCGGTCAGGCACACGCCTCGCCGGGCGTTTGCCGCTTGAGAAACAGGTAGTAAGA
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DNA Sequence for Gene |
>H618_RS0111100
ATGGCAAAAGAATATAGCCGTACCCAACGCATTGGCGATCAGATGCAGCGCGAGCTGGCCGAGCTGATCCGCCGTGAAGTCAAGGACCCGCGCGTCGGCC TGGTGACCATCACCGCCGTCGACGTCAGTCGCGACGTTGGCCATGCCAAGGTATTCATCACCGTCATGGGCGGCGATGATGCCGACGCCGTGCCGCAAAC CCTCAAGGCATTGAACAATGCCGCGAGCTTCCTGCGCTTGCACCTGGGTCGTGCCATGCAATTGCGCAGTGTGCCGCAGCTGCACTTCCACTACGACGAA AGCGTCAGCCGCGGTGTGCACCTGTCGGCGCTGATCGAGCGTGCGGTGGCTGAAGATCGCCTGCATCAGCAGGGCGATGAGTCGGACACCAAGGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGTGGCGCAGGTCAAACGTATCCGCCGCAACGTCAGCGGCATCATCCTGCTCGACAAGCCATTGGGGTTCACCTCCAATGCCGCGTTGCAGAAAGTG CGCTGGTTGCTCAACGCGGAGAAGGCCGGCCACACCGGCAGCCTCGATCCGCTGGCCACCGGCGTGCTGCCGCTGTGCTTCGGCGAGGCGACCAAGTTTT CCCAGTACCTGCTCGATTCCGACAAGGGTTACGAGACGGTCATGCAGCTTGGGCAAACCACCAACACCGCCGATGCCGAAGGCGAAGTGCTGCGAACCCG CGAAGTGACCGTCGGTCGCGCCGACATCGAAGCGGCATTGCCGGCGTTTCGCGGCCCGATCAGCCAGGTACCGCCGATGTACTCGGCGCTCAAGCGCGAT GGCCAGCCACTGTACAAGCTCGCCCGTGCAGGAGAGGTAGTGGAGCGCGAGGCGCGTTCTGTTACTATTACGCGCCTGGAACTGCTGCACAGTGAAGGTA
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Amino Acid Sequence |
>ribosome-binding factor A
MAKEYSRTQRIGDQMQRELAELIRREVKDPRVGLVTITAVDVSRDVGHAKVFITVMGGDDADAVPQTLKALNNAASFLRLHLGRAMQLRSVPQLHFHYDE SVSRGVHLSALIERAVAEDRLHQQGDESDTKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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