Pseudomonas cremoricolorata DSM 17059, H618_RS0106490
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGCCCCGGAGTTGCGCGTGCGGCAGACCGCTGAAGGCCTGGGGCTCAGTGGCGAGGTAGTCGACGCTTTGCGCGATTGTGATCTCGGCGCATGGCAAG GCCTGTCGCTCAAGGCCTTGCAACGCGATGCTGGCGCTGCTTTGCAGCACTGGCTCGACGACCCGCTCGCCGCCCCCCACGGCGGCGAGTCGCTGCATCA GTTGCAACTGCGCGTTGGCCACTGGCTGGAGCATGGCCTCGGCCCCGGCCGCTGGCTGGCAATCACCCATCCCCACGTGATGCGCGCCGCCGCGCGGCAC GTGCTCGACCTGTCGTTCCCTGCAAGCCAACGGCTCGATATCCGGCCGCTTGGAGCGCTGCATTTGAGTTGGTATGGGCGGTGGCGGGTGAGGGTGGTTG GGTAGGGGCGGGGTTGCGGGCCACTCCGGTCGTCACCCAGATCGATCACTCCTGAAAAAGGCGGGTCAACTACCTACCTCAGGTCGAACCGGGTGCTGGA
|
|
| DNA Sequence for Gene |
>H618_RS0106490
ATGGACTCTCTTCAGGGCAAAGGTCTGCCGCCGCGCAGTCAGGTGGTCCGGCAACTGATCGTGATGTTTGCAGTGCTGCTGGTACTGACCCTGACCATCG CCCTGGGCTCGCTATGGCGCATTGCCGCCGGGCTCGATCAGCGAGAAATCACGCAAAGCCGCTTCCATGCCAAGTCTGCGCTCGATCAACTGCACGCTCG CGAGCGCAGCTATGTGCTGGGCCACGGCTTCTGGCAAGCCGCCTACGACCACCTCAACGGCCCGGATGCGGCAGCCTGGGCGTTCGAACAGGACAACATC GGCCCGACCTTGTCGACCCAGGACGGCTACCACGCCGTGTATGTGCTGGAGCCGAACGCCAGCCGCTACGCCATGCTCGCCGGGCAGTTGAGCGAGCAGG GGCTGGCGGCGCACAGCGACAGTGCTGCGCGTATTCTTGTTCAGGGGCGCCAGGCAGGGCAGCGCGGTGAGGCGACTTCCGGCTACCTGTTGTTCGATGG CCAGCCTGCGCTGTTCGCTGCATCGCTGATTCGCCCGCCAGCACTGGCCCATCATCTGCCGGCACCGACCTCGGTACTGGTGTTCATTCGTCTGCTGGAT GCGTCGGTGCTCGATGGCCTGGGGCGCAGCGCCGGGTTGACTGGCTTTGCCACCGCCACACTCGCCGCTGCCGATGACCAGCCCGATCAGCTACCGCTCG AAGGAAGCGGGCACGTGCTGACCTGGCGCACCCCGCAGCCCGGCGCCGAGCTGCTGCGCAGCGTGCTGCCGCCGCTGGCGCTGGCGGCGTTGATCATGGC GTTGATTCTGTCGATCAGCGCCCGCTATGCGATGCGCGCCAGCGCCAGCATCGACCGCAGCCAGCAGAAGATGCTGGCCTCACAGGCCGCCTTGCAGAGC AGCGAGGCGCGCTTCAAGGCGGTGGCCGAAGCCGCCTCTGACTGGATCTGGGAGACCGACGCCGAGCTGCACCTGACCTACCTCTCGGCACGCTTCGCCG AACTGACGCGGCACCGTGTGGAGGACTGGCTGGGGCGGCCGATCACCGCCTTGCTCGATTGCGACACCGGCGATGTGCGCCGCTGGCTGCAGGGCCTGGC TATTTCGCAGGCCGCGGGCAGCCTGCGCTGCCAGTATCACGACCGTCTGGAGCAGCGGCGGATCTGCCGCATCGCGGCGCGCGCCATCAGCGCGGACGGC CGCTGCCAAGGCTTTCGCGGTACCTGCAGCGACATCACCGATGAAGTAGCCGCCCATGCGCAGATCCAGCACCTGTCGCGGCACGATGCCCTCACCGGAT TGCCCAATCGCAACCAGCTGATGCGCTTTCTCGAGCAGGACGGCAAAGGCAGCGGGCAGGTGCCGCTGGCGGTGCTGATGCTTGACCTGGACAACTTCAA GCCGGTCAACGACCGCCTCGGACACGCAGGCGGCGACGCGCTGCTGATCGAGCTGGCCGCGCGCCTGAGCCGGAGTGTGCGTGAATGCGACCTGGTGGCG CGTCTGGACGGCGACGAGTTCGTCCTGGTGCTGGTGCGACCTGGCGCGCGCAGCGAGCTGGAGCGCTTCTGTGAGCGGGTGATCAGCGCGCTGCAAGCAC CGATCGACTTCGAAGGCCACCGCTTGCAGGTGGGGGTGAGCATCGGCATTGCCCTTTCGAGCCAGTACCCCGGCAGCCCCGCCGAGTTGATCCGCTGCGC AGACGTTGCGCTGTATCAGGCCAAGCGCGATGGCAAGCACACCTGGCGTTTCTTCTCGGCGGAAATGAACAGCGTCCTGACCGAGCGCCGCGTGCTCGAG CGCGACCTGCGCCAAGGCATCGGGCGCGGCGAACTGGTGCTGCATTTTCAGCCTCGCTACAAGGTCGACGGCCTGAGCATCGCTTCAGTCGAGGCGCTGG TGCGCTGGCAGCACCCCGAACAGGGCCTGCTGATGCCGGATCGGTTCATCGCTCTGGCCGAAGAATCCGACCTGATCGTGCTGCTGGGCAACTGGGTGCT GGCCCAGGCCTGTACCTGCGCGCTGCAATGGCCACTGCCGGTGACTGTCTCGGTGAACATGTCGCCGGCGCAGTTCAGCCGCAGCGACGTGGTCAGCGAC GTGCGTCAGGCGCTGACCCACTCAGGCTTGCCGGCGCAGCGCCTGGAGCTGGAAATTACCGAGAACGTGATGCTCAACGACATCGAAGGCGCCCTGCAAA CCATGAACGCGCTCAAGGAGCTGGGCGTACGCCTGAACATGGACGACTTCGGCACCGGCTATTCATCCCTGGGCTATCTGCGCACCTATCCGTTCGACAG CATCAAGATCGACAAGCGCTTCATTCAGTCACTGGCAAGCAGTGCCAGCGACCGCTGTGTGGTGCAAGCGATCATCAACCTGGGCCGGGCGATGAACATG ACCGTGACCGCCGAAGGGGTGGAAACCGCCGAACAGCTGGCGGTGCTACGTGCCGACCAGTGCCATGAGGTGCAGGGTTACCTGCTCAGCCGGCCGCTGC CCGATCAGCGCCTGGTGCAATTGATGAGCGCAACGCCGCGCCAGCCGGCCTCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGGCTGCATCAGGACTGGTTGCTGCGTTCCACCTGCAACACGCTGCGCGCGGTACAGCACTGGCAGCGGATACTCACCTGTTGCGCCTCGACACGTGCC TGCACGGCACTGGAGCCGCAGTGGCTGCAATGCAGGCTGGCGGTGCTGATCTGCGCCGGTTCCAGGGGCTGGGGCAGGGCGTTGAGGTAGTCACTCAACG GCCGCTCGACGCCGCCGTCGTGATGGCCGAGCAACAGGCCATGCAGCACGCGACTGTAGGCCGAACGCGGTGCGCTGGCGCTGTGCCGCGAAGCCTCGAG CGGCCACTGCTCGTCGATGGCTCGCTGGCCCAGCGCCCAGAGCTTGCCGGGCAAGGTCTGCGCTGCATGCTGGGTGTTGACGTTGCAGCGTTCGGCGAAC TGCACGGCGCTGCGCAGGGCGCTGTTGGCCAGGTACCAGACGCTGCACACTGGCAGGCGTTGCAGCAGTTGCGCAGCCAGTTCCCGGCTGCGCTCGACAC
|
|
| Amino Acid Sequence |
>histidine kinase
MDSLQGKGLPPRSQVVRQLIVMFAVLLVLTLTIALGSLWRIAAGLDQREITQSRFHAKSALDQLHARERSYVLGHGFWQAAYDHLNGPDAAAWAFEQDNI GPTLSTQDGYHAVYVLEPNASRYAMLAGQLSEQGLAAHSDSAARILVQGRQAGQRGEATSGYLLFDGQPALFAASLIRPPALAHHLPAPTSVLVFIRLLD ASVLDGLGRSAGLTGFATATLAAADDQPDQLPLEGSGHVLTWRTPQPGAELLRSVLPPLALAALIMALILSISARYAMRASASIDRSQQKMLASQAALQS SEARFKAVAEAASDWIWETDAELHLTYLSARFAELTRHRVEDWLGRPITALLDCDTGDVRRWLQGLAISQAAGSLRCQYHDRLEQRRICRIAARAISADG RCQGFRGTCSDITDEVAAHAQIQHLSRHDALTGLPNRNQLMRFLEQDGKGSGQVPLAVLMLDLDNFKPVNDRLGHAGGDALLIELAARLSRSVRECDLVA RLDGDEFVLVLVRPGARSELERFCERVISALQAPIDFEGHRLQVGVSIGIALSSQYPGSPAELIRCADVALYQAKRDGKHTWRFFSAEMNSVLTERRVLE RDLRQGIGRGELVLHFQPRYKVDGLSIASVEALVRWQHPEQGLLMPDRFIALAEESDLIVLLGNWVLAQACTCALQWPLPVTVSVNMSPAQFSRSDVVSD VRQALTHSGLPAQRLELEITENVMLNDIEGALQTMNALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFIQSLASSASDRCVVQAIINLGRAMNM TVTAEGVETAEQLAVLRADQCHEVQGYLLSRPLPDQRLVQLMSATPRQPAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|