Pseudomonas cremoricolorata DSM 17059, H618_RS0105920
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAACCTGGCCATCGCCGTCTCCGCTGGCCGCGTAGCGTCCGCTTCGGCCGGTGCCAACCAGAGCACCAGCGGTCTGAGCGTCGAAAACCGCGCCGACCGC AGCTACGAGGTCACCACCCTCAGCACCACCACCAATGCCACTGGTACCTATAAAGGCACCGGTTCTGGCTACATCGAGCAAAGCGGCTACGGTGGCACCC AACGTCATCCGATCAAAATCCACGAGGAAGGCACCTTTGGCCTGGCAGGTTCGTCCTCCTACCAAGTGCTGACCCCAACCGGCTGGCGTAACCCTGTGAC CAACACCGCCACCTTGAACAACTCGCTCAACGGCGTGTCGGGCAATGTCGGCGCCAACGTCTCGGCTGGCACCAGCAACCAGCAAAGCAACTCGCTGGCC ATTGCTGCAGGCTGCCAAGCCTGCAAGTAAGACGCTGCGCGAACAGGGCCCCTTGGGGCCCTTTTCTCGTCTGTAGCTGAAGCTGTCGCTGGAGAAGATC
|
|
| DNA Sequence for Gene |
>H618_RS0105920
ATGCGCGTCGTTCTACTTGCCGCACTGATGTGCCTGAGCGGGCTGTCCGCAGCCGCGCAGATGGCTGTGGTGGCATTGCCTGGCGGCAACCTGGTGTACA AGCCCGTGCAAAGCGTGCGCGAACGGCGTTTCGCCGACCTGGTGCAGCAAGGCACCGACTTCAGTTGCGGCGCTGCAGCGCTGGCCACCGTGCTCAAGCA GGCCTACTGGCTCGACGTCGACGAGCATCAGGTGATCGAGGGCATGCTCGCCGAATCAGACCAGGACACCGTCAAGGTGCAGGGCTTCTCCATGCTCGAC ATGAAGCGCTATGTCGAAAGCATCGGCATGCGCGCCCGCGGCTATCGCGTCGAAGCCGACAGCCTGCAGCGCATCACCATTCCGGTGGTGGTGCTGATGG ACATCCGTGGCTACAAGCACTTCGTGGTGCTACAGCGCGTCGACAAGGGCTGGGTCTACATCGGCGACCCAGTGCTTGGACACAAACGCTACAAGTTCGA CGACTTCGTCAAAGGCTGGAACGGCATCGTCTTCGCCGTGATCGGCCCAGGTTACGACAAGGCCAACGCCCTGCTCGACCCACCTGCGCCGCTCACCGCG AAAACCCGCGTCGACGGATTCTTCCCGGTCGAGGATGCGCAGTTGATGGAGTTCGGTTTCATCCAGAGCGATTTCTTCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGACGACAGGAGCACGAAGCTCCGGGGAGCAACGATGAAGATTTCCACCTGGCTGGTCGCCGCCTGCCTGGCGACCAGCCTTCCGGTTCACGCCCAGTTG TTCAAGCCAATCGAAATGAAGGATCAGGAGCTTGCGCAGTTGCGTGGCAAGTACGTCATGCCGGGGCGCATCATCAGCTTTGGCGTGGTCATGAGCAGCA CCTGGCAGAACGCAGCCGGCGACCGCATAGGCGCCACCACCACCCTGCAAGTGCAGCAGAACGTGATCAAACCGCAGTTCTACGTGTCGATCAGCGGCGA GAACGGCAAAGGCGGCGTGCCCGGCCAGGGCACGGGCGTGGTGCAGGGCGGCGCGGGCCTCACCGGCAATGTCCAGGGCGTGACCCAGACGGTACGCGTC GCCGGCGATAACAACAGTGCTTACAACGACGTCGCAATCAATGTTCGCGAAGCCAGTCAGGCGCCCGATCTGGCCACGCCACAGGGCCAGGCGCTGAGCG
|
|
| Amino Acid Sequence |
>peptidase C39
MRVVLLAALMCLSGLSAAAQMAVVALPGGNLVYKPVQSVRERRFADLVQQGTDFSCGAAALATVLKQAYWLDVDEHQVIEGMLAESDQDTVKVQGFSMLD MKRYVESIGMRARGYRVEADSLQRITIPVVVLMDIRGYKHFVVLQRVDKGWVYIGDPVLGHKRYKFDDFVKGWNGIVFAVIGPGYDKANALLDPPAPLTA KTRVDGFFPVEDAQLMEFGFIQSDFF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|