Pseudomonas cremoricolorata DSM 17059, H618_RS0102400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00073
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1514 1625 1.9E-28
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 22 137 1.0E-7
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1352 1483 3.0E-20
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1161 1346 6.9E-54
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 438 525 1.7E-12
SMART SM00260 chew_2 IPR002545 CheW-like domain 1339 1483 2.4E-20
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 566 697 9.9E-16
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 570 665 0.027
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1511 1629 7.54E-38
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 873 971 8.83383E-11
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 873 990 4.58E-26
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 573 662 3.8394E-7
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 435 523 3.45326E-9
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1251 1265 1.3E-12
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 873 970 1.8E-6
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 573 662 7.1E-10
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1514 1625 2.12857E-34
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1421 1481 1.5E-18
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 873 1002 1.5E-27
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1307 1325 1.3E-12
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 570 691 2.36E-17
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1206 1347 3.8E-25
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 709 1624 0.0
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1024 1161 1.1E-7
Gene3D G3DSA:3.40.50.2300 - - - 1514 1633 1.4E-42
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 435 557 7.46E-23
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1331 1344 1.3E-12
CDD cd16916 HATPase_CheA-like - - 1169 1344 2.01801E-79
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1346 1479 2.09E-21
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 876 967 3.0E-14
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 712 834 4.9E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 24 135 3.27E-15
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1210 1346 9.5E-15
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 435 565 1.2E-23
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1512 1625 9.2E-38
Coils Coil Coil - - 1062 1082 -
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1163 1344 6.51E-37
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 707 829 2.59E-13
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1162 1346 9.0E-62
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 435 531 0.0076

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.