Pseudomonas cremoricolorata DSM 17059, H618_RS0102390
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCAGTTCCTGACCAAACCATTCAGCAAACAAGCGTTGCTCGACGCCATCCGTGCCCATGTGCCGGGTTTCGTCGAGCAGCCACAACACGCCTCCTGAC GCCGGCCACGGCGTCGTAGTTCCTGACGGGGAAACAGCATGGCCCGAGTTCTGATTGTCGACGACTCGCCGACCGAGATGTACAAGCTCACCGACTGGCT GGAAAAGCACGGTCACCAGGTGATCAAGGCCAGCAATGGCGCCGACGGCGTGGCCCTGGCCCGCCAGGAAAAGCCCGATGCGGTACTGATGGACATCGTC ATGCCCGGCATGAACGGCTTCCAGGCCACCCGCCAGTTGTCCAAGGACCCGGAAACCCGCGACATCCCGGTGCTGGTGGTGACCACCAAGGACCAGGACA CCGACCGTATCTGGGCGACACGTCAGGGTGCGCGTGATTTTCTCACCAAGCCCATCGACGAAGAGGCGCTGATCAGCAAGCTCGACGAGGTGCTCAAGGC
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| DNA Sequence for Gene |
>H618_RS0102390
TTGACCACCCGGCCGCAAGGCGCGTCGCTGACCGCCTTCGAACTGCTGCTGGACATCGACCGCCGCTGCCGCCTGCTGGTGGCCGATCAGCCTTTCGAAC CCAGCCCGGCGCAAGCCTGGAGCGGCATTGGCTTTCGCATCGCCAGCCACTGGTTCGTCGCGCCCATGGGCGAGGTGGCCGAGGTGCTGCGTGAACCGCG CAGCAGCCGCGTGCCCGGGGTGCGCCCGTGGGTGGTGGGGGTCGGCAACCTGCGCGGGCGCCTGCTGCCGGTGCTCGACCTGTCGAGCTTTCTTGGTCTC GCCCCGGTGGCGCCGGGCAAGCAGCGTCGGGTGATGGTGCTCGACCACGACGATCTGTTCGTCGGCCTGCTGGTCGACGAGGTGCTGGGCCTGCAGCATT TCGACCTCGAGCAACTGCAGCCAACGCCGCCGCAGCCGTTGCTGCGCAGTGCCGCGCGCTTCGTTCAGGGGCATTTCCCCGGCGCACGCAACTGGGCGAT CTTCAGCCCGTTCGCCCTGGCCCAGGCGCCAGGTTTTCTCGATGTGGCGTTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGATGCTGTCTTGAGCAAGTCCACCCCTGGCGTCACTCCGCCGCCGATGACCCAGCGCACCCGCAGCAGCGCGCAGATCACCGTGCTGTTCGTGGTGCT GATTCTGTCGATCGTGCTGCTGTTCGCCAACTTCGCCTACCTCAACACCCAGTCGACCTACGACAAGCAGTACATCGGCCACGCCGGTGAATTGCGCGTG CTGTCGCAGCGCATCGCCAAGAACGCCACCGAGGCCGCAGCCGGCAAGGCCCTGGCGTTCAAGTTGCTGTCCGATGCGCGCAACGACTTCGACCGCCGTT GGGGCTACCTGCGCCGCGGCGACCATGCCACCGGCCTGCCCGCCGCACCGGCCGCGGTGCGCGACGAAATGGCCGCCGTCGGGCAGGACTGGGACAACTT GCTCAAGAACACCGATGTCATTCTTTCCAGCGAACAGACCGTACTGTCGCTGCACCAGGTGGCCGCGACCTTGGCCGAGACCGTGCCGCAGTTGCAGGTC
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| Amino Acid Sequence |
>protein PilI
MTTRPQGASLTAFELLLDIDRRCRLLVADQPFEPSPAQAWSGIGFRIASHWFVAPMGEVAEVLREPRSSRVPGVRPWVVGVGNLRGRLLPVLDLSSFLGL APVAPGKQRRVMVLDHDDLFVGLLVDEVLGLQHFDLEQLQPTPPQPLLRSAARFVQGHFPGARNWAIFSPFALAQAPGFLDVAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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