Pseudomonas cremoricolorata DSM 17059, H618_RS0101790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGACGGCCCCACACCAATCTTGAACAGGTCGAACACGCTGATGGCCATTGTCGAATCACCTCTTGATGGGCTTGTCTGCACGCGTCGTTGCGTGCCG TGATGCGTCCGCCAGGCTGCGGCCGACCACTGTGAATGCGCGCATCATCGGGCTTTTGTCCTACAGTTCGCCGTCTGCAACGGACGTACTTTTGTCAACC AGCGCCCCGGCAACACGCCGTTGCAAGCCCCTGGCACGGGCGTTTTCAAAGCGCCGGATGCCGCAAAACCGGCGCTCGGCGGGCAGAACAATCTCTAAGC GACATTGCACATACTGGATACGACCTGTGCTGCACTGGATACGACCCTGGCAGTAGGCGAATGCCGAACGCTGGAGGATTATCGAAAGCGACTCGTATTG CACGGCCCCGCAACCTGCCCTCTGCAGGCCTGGACGATCGAAGCCCGAAGAAGGCTCGGCGACCCCGCGAACCCGAAGACAAAATTAATGGAGTCCACCC
|
|
| DNA Sequence for Gene |
>H618_RS0101790
ATGAAAGCCTCACCCTCGCTGTTGCTGGCCGCGTTGTTAGCCACACCGCTGCTGGCCCAGGCCGCCGAACCCGAACAGTGCCAGACGGTACGCTTTTCGG ACGTAGGCTGGACTGACATCACCGTCACCACCGCTGTCACCAGCGCCGTTCTCGAAGCCTTGGGCTACAAGACCAAGACCACGATGATTTCGGTACCCGT CACCTACAAATCCCTCGCTTCCGGCAAAGACCTCGACGTATTCCTCGGCAACTGGATGCCGACCATGGAAAACGACATCAAGGCCTATCGCGATGCCGGC ACCGTCGAAACCCTGCGTCCCAACCTGGAAAACGCCAAGTACACCCTCGCCGTCTCGCAGTCGCTGTACGACAAGGGTCTCAAGGACTTTTCCGATATCG CCAAATTCAAGAACGAGCTGGGCGCCAAGCTGTATGGCATCGAACCTGGCAACGACGGCAACCGCACCATCCAGAGCATGATCGACAAGAACGCCTTCGG CCTGAAGGACGCCGGCTTCAAGCTGGTGCAATCCAGCGAAGCGGGCATGCTGACGGCCGTCGAACGAGCCAAGCGGCAGAACGAAGGCGTGGTGTTCCTT GGCTGGGAACCGCACCCGATGAACAAGCGCTTCCAGATGCAGTATCTGACTGGCGGCGACGACTTCTTCGGCCCTGACTTCGGCAAGGCCACCGTCTATA CCAATACCCGCAAGGGCTATGCACAGGAGTGCAGCAACGTCGGGCAACTGTTGAAGAACCTGTCGTTCACCCTGGACATGGAAAGCACGCTGATGGGCAA GGTGCTGGACGACAAGATGAAACCCAGCGCCGCTGCGCAAGCGTGGCTGAAGAACAACCCTCAAGTACTCGACACCTGGCTGGCCGGGGTGACGACCGTC GATGGCAAACCGGGGCTGGAGGCGGCCAAGGCCAAGCTGACGCAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGAAAGTCGCAATAGCAGGCGGTCTGCCCAGGCCGCCAGGCACTACCGCGGGGCGGGACCGTGCCCTCCCCGGACTGATTTCAATCTTTGCAGGTGGAAG CTCGCTATCATGCTCATCGATCAGAAAATACCGCTAGGCCAGTACATGGCAACCTTCGTCGAGTGGCTGACGCAAATCGGCGCCAACTATTTCGACGCTA TCGCCAAAGGCCTGGAATTCATGATTTACGGGGTCACCAGCGCCCTGACCTGGTTCAACCCTTTCGTGCTCATCGCTATCTTCGCCGCGCTCGCGCACCT GATTCAGCGCCGGGTCGCCCTCACCGTCTTCGTTGCCCTCTCGTTCCTGCTGATCCTCAACCTGGGGTACTGGCAGGAAACCATGGAGACCCTCGCCCAG GTCACCTTCGCCACCGTGGTGTGTGTCGCCATCGGCGTACCGCTGGGTATCGTCGCTGCGCACAAACCGATGTTCTACACCGCCCTGCGCCCGGTCCTCG
|
|
| Amino Acid Sequence |
>glycine/betaine ABC transporter substrate-binding protein
MKASPSLLLAALLATPLLAQAAEPEQCQTVRFSDVGWTDITVTTAVTSAVLEALGYKTKTTMISVPVTYKSLASGKDLDVFLGNWMPTMENDIKAYRDAG TVETLRPNLENAKYTLAVSQSLYDKGLKDFSDIAKFKNELGAKLYGIEPGNDGNRTIQSMIDKNAFGLKDAGFKLVQSSEAGMLTAVERAKRQNEGVVFL GWEPHPMNKRFQMQYLTGGDDFFGPDFGKATVYTNTRKGYAQECSNVGQLLKNLSFTLDMESTLMGKVLDDKMKPSAAAQAWLKNNPQVLDTWLAGVTTV DGKPGLEAAKAKLTQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|