Pseudomonas cremoricolorata DSM 17059, H618_RS0101225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCGCGCGCAGCAGCTTGAAGGGCGAGTTCCGCATGCAGCAGACCAGCATCGCGCCGTTGCAGAACAACCCGCTCAAATTCGCCCCCAATGCCGATGAA GCGCTGCTGTTGCTGCTGCGCCACGGCAATCAGGCGTTCATGGCGCCTGACCAAGCCGTGCAGGACAGCTTCGATGATCTGCGTGCCCACCAGATGGCGG TGATGGCCGGGGTCGAAGCCGCCATCAAGCACCTGCTGGCGCGCTTCGAGCCGGGCCGGCTGGAAGCCCGTCTGGCCCCGGCCAGTGGCCTGGCCAAGCT GTTCGGCAATTCCCGTCAGGCCCACTGCTGGCAGCAGTTCACCGAGTTGTTCGGGCAGATCTCCCGTGAGGCCGAAGACGATTTCCACGACCTGTTCGGC CGCGAATTCAGCCGTGCCTACCAGGCCCACAGCACCCGCAGCCCACGCCACTGAGCGACCCCGCCGACCAGGAACCGCACCCTTGATCACGAGAACACGG
DNA Sequence for Gene
>H618_RS0101225
ATGACAATCACCAGGCTGGTCGCTGCTGCGGCCCTGATCCTGCTCAGTGCCTGTAGCAAGGACGCCACGCCCCAGGCCCCGGCCGAGCATGCGCTGCAGT TGTATTTCAGCGCGGCAGCCGGGCTCAACCCCGGCGCCAGTGGAGAGGCGGCGCCGGTGCGCGTGCGCATCTTCGAATTGAAGAACGCCGCGGCCTTTGC CCGCGCCGATTATTTCGCCCTGGCCGAACGCGCCCAGCAAACCCTGGGCAGCGACCTGATCGATCAGGACGAAGTGCTGCTGCGCCCTGGCCAGCAACTG CCGGTGCAACGTGCACTGGACCCATCGACCCGGCAGATCGGCCTGGTGGTCGGCTATCGCGAGATCGACCGCGCGCAATGGCGCGCCGTGCTGGCGGTGC CGCCGCGTGATTACCAGATCAGCCTCGATGTGCGCGCCGTGCGCAGCGCCGTGGCCACCCCTCAACCTGCGCCTGCCCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCACCGGAGCTCCCATGTCCTGGAACAATCGTGTCGTCTGGTCGGAAGGGATGTTCCTCACCACCCAGCATTTCCAGCAGCAAGACCGCTATCTGGAAA ACCTCATCGACGCCCGCAGCCGCCCGCTGCACGCTGCGGCCTGGGGTTTTTCCGAGCTGCTGATCGATCAGGGCCTGCTCAGCCAGGGCAAGCTGGCGAT CCTCTCCGCCCGTGGTCTGCTGCCCGATGGCACACCGTTCGACATTCCCCGTGACGACCTGCCGCCGCCGCCGCTGGAAATTCCCGAAGACCTGCGCGAC GGCGTCATCTACCTGGGCCTGGCGCTCAAGCGCGCCGGTGCCCGCGACACCGTCGATGAGGGCCAGGCGCAGGAGGGCGCGCGCTATGTCAGCAGGGTCA GCGAAGTGCGCGACGACAATGCCGCTTTCGAAAACCGTGCGCCGCTGGCCCTGGGCAGCCGTGCCCTGCGCCTGTTGCGCGCCGAGGATGGCCTGAGCGA
Amino Acid Sequence
>type VI secretion protein
MTITRLVAAAALILLSACSKDATPQAPAEHALQLYFSAAAGLNPGASGEAAPVRVRIFELKNAAAFARADYFALAERAQQTLGSDLIDQDEVLLRPGQQL PVQRALDPSTRQIGLVVGYREIDRAQWRAVLAVPPRDYQISLDVRAVRSAVATPQPAPAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site