Pseudomonas vranovensis DSM 16006, H621_RS0122210
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00006.6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATTTCCTGGCCCTGAAGATTCGCGAGATCGGCCAGGAGCACAACATCCAGTTGCTCGAATCGCCGGCGCTGGCGCGTTCGATCTACTACTCCACCGAACT TGAGCAGGAAATCCCTGCCGGCTTGTACCTGGCGGTGGCCCAGGTGCTGGCCTATGTCTACCAGATCCGCCAGTACCGGGCGGGCAAGGGCAAGCCGCCG GAGCCGCTCAAGGACCTGCCGATCCCGCCGGACCTGCGCCGCGATTCCTGATCTTTCGTGGTGATAGGAGCGCGACTGCTGCGCAGTCGATTGCGGCCTC GTTCCTCGGCAGCGGCTACAGATTGCAGGCTTGGCTCGCGTAGCCGCTGGCGGGAGCCTGTGATCGGCTGCGCAGCGGTCGCGGTCCAGCTCCTGGTGCA TTAATCCCCGGTATTTCGAAAGTTGGAAAGCTTCTTGCAAAGGCAGCGCTGCGCGCGTCATTTCGCGTCAAAGTTTTGCTTGAGCTAACGAGGAATACCG
|
|
| DNA Sequence for Gene |
>H621_RS0122210
GTGGATCGCTCTCAGTTAATCAACAGTGCCCGCAACAACCTGGCCGGCCTCGGCCGGGGCAATCTGGGTGTGCCGCTGTTGCTGCTGGTGATGCTGGCAA TGATGATGTTGCCGATCCCGCCGTTCCTGCTCGACGTGTTTTTCACCTTCAACATCGCCCTGTCGATCGTGGTCCTGCTGGTCTGTGTCTACGCCCTGCG CCCGCTGGACTTCGCCGCCTTCCCGACCATCCTGCTGGTGGCCACCTTGCTGCGCCTGGCCCTGAACGTGGCGTCCACGCGCGTGGTGATGCTCCACGGC CACGACGGCCATGCCGCCGCCGGTAAGGTGATCCAGGCCTTTGGCGAGGTGGTGATCGGCGGCAACTATGTGGTCGGTATCGTGGTGTTCGCGATCCTGA TGATCATCAACTTCGTGGTGGTGACCAAGGGTGCCGGGCGTATTTCCGAGGTGAGCGCACGCTTTACCCTCGATGCCATGCCAGGTAAGCAGATGGCCAT CGACGCCGACCTCAACGCCGGCCTGATCGATCAGAACCAGGCCAAGGCGCGGCGTTCGGAAGTGGCTCAGGAGGCCGAGTTCTACGGTTCAATGGACGGT GCCAGCAAATTCGTGCGCGGTGATGCCATCGCCGGCCTGCTGATCCTGTTCATCAACCTGATTGGCGGCATGCTGGTCGGTATGTTCCAGCACGGCATGA CGTTCGGCGACGCTGGCAAGGTCTATGCGCTGTTGACGATTGGTGACGGTTTGGTGGCGCAGTTGCCGTCGCTGTTGCTGTCTACCGCGGCTGCGATCAT GGTGACCCGTGCCTCCGGCTCCGAGGACATGGGCAAGCAGATCAATCGGCAGATGTTCGATTCGCCCAAGGCGCTGGGTGTGTCGGCGGGCTTGATGATT GTCATGGGCCTGGTGCCGGGCATGCCGCATGTTGCCTTCCTCAGCCTGGGCCTGCTGGCCGCCGGCGGTGCCTACCTGGTGTGGCGCAAGCAGAACCAGG TCAAGCTCAAGGCCCAGGAAGAAGTGCAGCGCCAGCAAGACCTGTTGCCATCGCCACAGCGTGCCGCCGATACCAAGGAGTTGGGGTGGGATGATGTCAC GCCCATCGACATGATCGGCCTGGAAGTGGGCTACCGGCTGATCCCCCTGGTGGATCGCAACCAGGGTGGGCAATTGCTGGCGCGGATCAAGGGCGTGCGC AAGAAGCTCTCCCAGGACCTGGGCTTTCTGATGCCCACGGTTCACATCCGCGACAACCTGGACCTGGCGCCCAGTGCCTATCGCCTGACCCTGATGGGGG TGATCCTGGCCGAGGCCGAGATCTACCCGGACCGTGAGCTTGCGATCAACCCGGGGCAGGTGTTCGGCACCCTCAACGGCATTGCCGCCCGCGACCCGGC CTTCGGCCTGGAGGCGGTGTGGATCGACGTCGGCCAACGCAGCCAGGCGCAGTCGCTGGGCTACACCGTGGTGGATGCCAGTACCGTAGTCGCCACCCAC CTCAACCAGATTCTGCACAAGCACTGCCATGAGTTGATCGGCCACGAAGAGGTCCAGCAACTGTTGCAGGTGCTGGCCAAGGCATCGCCTAAACTTGCCG AGGAACTGGTGCCGGGTGTCATTTCATTGTCGGGTCTGCTCAAGGTGCTGCAGGCGCTGCTTGCCGAGCAGGTGCCGGTACGTGATATCCGCAGCATTGC CGAGGCCATCGCCAATAATGCCGGCAAGAGTCAAGATACCGCCGCGTTGGTGGCAGTGGTGCGCGTCGGATTGTGTCGCGCCATCGTGCAAAGCATTGTC GGCGTTGAGTCCGAGCTGCCTGTGATCACCCTGGAGCCAAGGTTGGAACAGATTTTGCTCAATAGTCTGCAAAGGGCCGGGCAAGGTCAGGAAGACGGTG TTCTTCTTGAACCGAGCATGGCTGAAAAGCTTCAGCGTTCGTTGATCGAGGCTGCCCAGCGTCAAGAGATGCAGGGGCAGCCGGCGATCCTGCTGGTCGC AGGACCGGTACGTGCAATGCTGTCGCGCTTTGGTCGCCTGGCTGTACCGAATTTGCATGTTTTGGCGTATCAGGAAATACCTGACAACAAGCAAGTTACC ATCGTTGCCACAGTAGGCCCCAACGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTAGTGGGTTATGCAAGTTAAGCGTTTTTTCGCTGCCGATATGCGTCAAGCCATGAAGCTGGTTCGAGATGAGCTGGGGGCTGATGCCGCCATCATCGG CAACCGACGGATTGCTGGCGGTGTCGAGCTGACGGCTGCGCTGGACTACAAGCTGTCTGCCCTGGCGCCACGGGTTCCGAATGTGGAACTGGAAGATGAA CTGCGCAAGACGCAGTCGCGAATTGTCACGGCCCAGGCCGAGCTCAGTACCCGCAACGACAGCGACGATGCCAACCGCCAGCTGTTCGCCGGCCTGCCGC TGACCGCCTCCGAGCCGCTGGTCGACACGCACGTGGATGAGCCGGTCGCGCCGCAGGTACCTGCGCCGGCACCGGTCGACCCGCGCCTGTTCGATGCCAT GCGCTCGGAACTCAATGGGTTGCGTGAATTGCTCGAAGTGCAGTTGGGTTCGCTTGCCTGGAGCCAGCTGCAGGGCAGCCAGCCACAGCAGGCCAACCTC
|
|
| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRSQLINSARNNLAGLGRGNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILLVATLLRLALNVASTRVVMLHG HDGHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQNQAKARRSEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMLVGMFQHGMTFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKQINRQMFDSPKALGVSAGLMI VMGLVPGMPHVAFLSLGLLAAGGAYLVWRKQNQVKLKAQEEVQRQQDLLPSPQRAADTKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRSQAQSLGYTVVDASTVVATH LNQILHKHCHELIGHEEVQQLLQVLAKASPKLAEELVPGVISLSGLLKVLQALLAEQVPVRDIRSIAEAIANNAGKSQDTAALVAVVRVGLCRAIVQSIV GVESELPVITLEPRLEQILLNSLQRAGQGQEDGVLLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVAGPVRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|