Pseudomonas vranovensis DSM 16006, H621_RS0121835 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00006.6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGGGTGGTGAAAAAGCGCTGACTGCCCTGGCCCTGGTTTTCGCCATTTTCAAACTCAACCCGGCACCGTTCTGCATGCTCGATGAAGTCGATGCACCAC TGGACGATGCCAACGTCGGGCGATATGCCAAGCTGGTCAAGGAAATGAGTCAGACTGTGCAGTTCATCTACATCACCCACAACAAGATAGCCATGGAGAT GGCTGACCAGTTGATGGGCGTGACCATGCATGAACCGGGTTGCTCACGTCTTGTTGCAGTTGATGTAGAAGAGGCAATGGCCATGGTCGACGCCTGATTT TGTGGGATACGGCGTGAACCTGCAGTAAATGGGCCTGTCAGTTGCGACAGACGGTGTAAAGTTATCTTTGGTCGTGCTAGCTTAATGTCACTTATCTTTT GCGTGGGTAAAACGCCTGTCAGAACATAGAGTTGGCGCCACGTTTTAAAGGGGTTTAAACCCTTTATTTTTCAGCATTTTTTACAGAGGCACGGGATTAC
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| DNA Sequence for Gene |
>H621_RS0121835
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATCGTCATCGGCATCATTGTCATTGCCGGTATTCTTTTTGACGGCTGGCGCCGTATGCGCGGCGGCAAGGGCA AGCTGAAATTCCGTCTGGATCGCAGCTTTTCAAACCTGCCTGACGAAGAAAGTAGCGGCGGTGCAGAAGTGTTGGGCCCGCCACGGGTGCTGGACAACCA TAAAGAACCCGAGCTGGATGAGCATGACCTGCCGTCCATGAGTGCGCCTGCCCGCGAGCGTGACAACAAGCCCAAGGCTTCCAAGCGCAAGCGTGGCAAC GAACCCCAGCAGGGCGACCTGAACCTGGCCGCCGAACCGCGTGAGCGCGAGCCTGACCTGTTCGCCAGTGTTGACGACGATTTCCCGGATGAGACCCGTA GCAGCAACGGCTACGGTGCCAACGAAGCTCGCGACCTGCCGCCCGTCGAAGAAGTGCTGGTGATCAGTGTGATTTCCCGTGACGAAGGTGGCTTCAAGGG GCCGGCCCTGCTGCAGAACATCCTCGAAAGTGGCCTGCGCTTCGGCGAAATGGATATCTTCCACCGTCACGAGAGCATGGCCGGTAACGGCGAGGTGCTG TTCTCCATGGCCAACGCGGTCAAGCCCGGCGTATTCGACCTGGACGATATCGATCACTTCAGCACCCGTGCCGTGAGCTTCTTCCTCGGCCTGCCAGGGC CGCGCCATCCGAAGCAGGCCTTTGACGTGATGGTGGCTGCCGCACGCAAGCTGGCCCACGAGCTCAACGGCGAGCTCAAGGATGACCAGCGCAGCGTGAT GACTGCCCAGACCATCGAGCATTACCGCCAGCGCATCGTTGAGTTCGAGCGTCGTGCGCTGACTCAGAAACGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATCATCACCCCCGGTGGGAGCGGGCTTGCCCCGCGATGAAGCCCCAAACGCAAGAGCAGCCCCGGCTGCTCTTTTGCTTTGCAAGAGAATACGAACATG ACTGCCCAATCCCGAATCCTTGAGTTGCGTGCCGAGCTCGATCAGCACAACTACCGCTACTACGTGCTCGACGAACCCAGCGTGCCGGATGCCGAGTACG ATCGTCTGTTCAACGAACTCAAGGCCCTGGAGGCCGAGCACCCGGAACTGGTGACCGCTGATTCGCCCACCCAACGCGTTGGCGGTGCAGCGTTGTCGGC GTTCAGCCAGGTGCGTCACGAAGTGCCGATGCTGAGCCTCGGCAACGCCTTCGAGGAAGACGACCTGCGCGAGTTCGACCGTCGGGTGGTCGAGGGCCTG GATCTGCCGGCGGGAGATCTGTTTGGTGGCGGTGCGGCGGTCGATTACAGCTGCGAGCCCAAGCTCGACGGCCTGGCGGTCAGCTTGCTGTACCGCGACG
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| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLIVIGIIVIAGILFDGWRRMRGGKGKLKFRLDRSFSNLPDEESSGGAEVLGPPRVLDNHKEPELDEHDLPSMSAPARERDNKPKASKRKRGN EPQQGDLNLAAEPREREPDLFASVDDDFPDETRSSNGYGANEARDLPPVEEVLVISVISRDEGGFKGPALLQNILESGLRFGEMDIFHRHESMAGNGEVL FSMANAVKPGVFDLDDIDHFSTRAVSFFLGLPGPRHPKQAFDVMVAAARKLAHELNGELKDDQRSVMTAQTIEHYRQRIVEFERRALTQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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