Pseudomonas vranovensis DSM 16006, H621_RS0119360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00029.29_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCCTTGCACCTAGCCGAGCCAAGGCAATTGCCGATGCCTCGCAGGCGCCGAAAGTCATGGTCGCGCTGCTTACCGACAAGGCCTATTCACGCCCAACCC GTCTCGACTTCCTTTCCAATGCCGCCGACCGTGGCACCGGCACGGTGCGGGTCCGTGCAATAGTCGATAACCCTGATGGTCAGCTGACGCCGGGACTGTT TGCCAAGATCAAACTGGATACAGGTGCGGCCCAGAGTCAGGTGTTGGTATCCGATCAATCCATCGGCACCGACCAGGGCAGCCGCTACGTGCTGGTGGTC GGGGAAGGTGACAAAACCCAATACCGGCCTGTCGAACTCGGGCCGATGGTCGACGGCCTGCGTGTCATCAATCAAGGACTGCAAGCCGGGGAGCGAATAG TCGTCAAAGGGCTGGTTCGCCCGGACATGCAGATTACCCCTCAGGTTGCCGCGATTGATGGTACGCCGCTCGATATGTCGCAAACCGTGGGAGTCGCGCC
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| DNA Sequence for Gene |
>H621_RS0119360
ATGACTTTTCCGCGTTTCTTCATTGATCGACCGATCTTTGCCATCGTCCTGTCAGTGTTGATGATGATTGCCGGCGTGGTGGCGTTCTTCCAGTTGCCAC TGAGTGAATACCCAGCCGTCACGCCACCCACAGTGCAAGTGACCGCCGCCTATCCGGGCGCCAACCCTAAGGTCATCGCCGAAACGGTCGCCGCCCCCCT TGAGCAGGCGATTACCGGGGTGGAGGGTATGCTCTACATGTCGTCGCAATCGGCCACCGATGGGCGCATGATCCTCACTGTTACCTTTGCCCAGGACACG AATGCCGACATGGCTCAGGTTCAGGTGCAAAACCGCGTATCACGGGTGCTGTCGCGGTTACCTGAGGAAGTGCAGCGTCAGGGTGTGGTTACACAGAAGA CCTCGCCAGACATTCTGATGGTGGTGCACTTGCTGTCCCCCGACAAACGTTACGATCCCCTGTACATCTCGAACTATGCCTACCTGCAGGTGCGCGATGA GCTCTCGCGTATTCAGGGCGTCAGCGATGTGCTGGTATGGGGCGCCGGTGAGTACAGCATGCGCCTTTGGCTCGACCCCAACCTGATTGCCGCCCGTGGG CTGACTGCGGGCGATGTGATTGCCGCCGTGCGCGAGCAGAACGTGCAGGTGGCGGCCGGCTCTGTTGGTCAGGCGCCTGATTCCACCGCTGCATTCCAGA TCACCGTGAACACCCTCGGGCGTTTGAGCGACGAAGAACAGTTTGGCGACATCATTATTCGCACCGGTGACAACGGCCAGGTGACGCGCCTGCGCGATGT CGCCCGCGTCGAGATGGGCGGTGATGCCTACGCGCTGCGCAGTCTGCTCGACGGTGAACCGGCGGTGGCCTTGCAGATCATCCAGAGCCCAGGAGCGAAC GCGCTCGATGTTGCCCAGGCGGTGCGCGATACCGTACAGCGGCTTGAGGGTAATTTCCCCGCAGGGCTGACCTCACGCATTGCCTATGACCCCACGGTGT TTGTGCGCGCTTCGCTGGAAACAGTGGCCACCACCTTGCTCGAAGCAATCTTGCTGGTGGTCATCGTGGTCGTGGTGTTCCTGCGCAGTTGGCGGGCTTC GTTGATCCCGCTGATGGCCGTGCCGGTGTCCCTGGTCGGCACATTTGCCGTCATGCACCTGATGGGCTTTTCCCTCAACACCCTGTCGTTGTTTGGTCTG GTGCTTTCCATCGGCATTGTCGTTGACGATGCAATCGTTGTGGTCGAAAACGTCGAGCGTCATATCGAAAATGGCGAGCCACCCACCCAGGCAGCAAGGC GTGCCATGGATGAGGTAACCGGTCCGATCATCGCCATTACGTCGGTGCTTGCTGCGGTGTTTATCCCGACCGCGTTTCTTAGCGGGTTGCAGGGCGAGTT CTATCGCCAGTTTGCGCTGACCATTGCCATTTCGACGATTCTCTCGGCGGTTAACTCGTTGACCCTAAGTCCGGCGCTCGCCGGCATGCTGTTGCGCCCG CGCAAGGCTGGAATTGTACGTGACCCGCATAGCCTGCGGGGCCGTGTTGTTCGGGTGCTGCAAGCGTTGGGCCGACCGTTCCAACGCGCCCCGGGTGCGT ATGGCAACACGGTGCGCAAGGTGGTGCGGGTCAGCGGGGTAGCACTGCTGGTGTATGTCGGGCTTCTGGGGCTGACGTACTTTGGTTTCCAGGCAGTGCC GCCAGGCTTCGTGCCGATGCAGGACAAGTATTATTTGGTCGGCATCGCCCAGCTGCCAAACGCAGCATCGCTAGATCGCACCGAAGCAGTGGTCAAACAA ATGTCCCAGATCGCACTGGCGGAACCCGGCGTTGAAAGCGTGGTGGCGTTCCCCGGTTTGTCGATCAACGGCTTCGTCAACGTGCCGAACGCCGCAGTGA TTTTCGTCATGCTCGATCCGTTCAAGGACCGTGCGACGCCAGATCTTGGCGCAACGGCAATTGCCGGGCGCCTGCAGGCGCAGTTCGCCACCATCCCGGA CGGCTTTCTCGGGGTGTTCCCGCCACCACCGGTCCCCGGCCTCGGGGCGACCGGTGGCTTTAAAATGCAGGTCGAAGACCGTGGCGGCGCGGGGCTGGAG GCGCTGGTTCAGCAGACCCAGATCCTGATGATGAAAGCCACCGAGTCAGGCCAGTTGGCCGGGCTGATGACCAGCTTTGACATCAATGCGCCGCAGCTCG ATGTGGTGATTGACCGTACCCAGGCGAAAAGCCAGGGGGTGAAGCTGGCGGATGTCTTTGAGTCGCTGCAGGTCTATCTGGGCTCGCTGTACATCAACGA TTTCAACCGCTTTGGTCGCACTTACAAGGTGACCGCGCAAGCCGATGCCGAGCATCGCATGCAGGCCGAAGCCATCGGCCGCCTGCAGGTGCGCAACGAG GCCGGGGCGATGTTGCCGCTGTCTTCGTTTGTCACGGTCTCGCCGAGTTCCGGACCCGACCGGGTCATTCGCTACAACGGTTATCCCTCGGCAGACATCA CCGGCGGTGCGATGCCAGGGGTTAGCTCAGGACAAGCAGTTGCGGTCATGGAGCGTCTGGCCAAAGAGGTGTTGCCCGAGGGCATGAGCTTTGAGTGGAC CGACCTGACTTACCAGCAAAAGCTGGCCGGCGACAGCGCGTTGTTCATTTTCCCGCTGTGTGTGCTGCTCGCTTATCTGATCCTCGCGGCGCAATACAAC AGCTGGCTGCTGCCCTTGGCGGTCTTGCTGATTGTGCCGATGTGTTTGCTGAGTGCGATTATTGGTGTGTGGCTGGTGGATGGTGACAACAACGTCTTTG TCCAGATCGGCCTGGTCGTGCTTGTTGGTCTGGCGGCCAAGAACGCAATCCTCATTGTCGAGTTTGCGCGAACACTTGAAGCGCAGGGATCAAACACCCT GGAGGCAGTCATCGAGGCCTGCCGATTGCGCCTGCGGCCGATCCTGATGACCTCGCTTGCCTTCATCGCCGGCGTGGTGCCGTTGGTATTGGCCAGCGGC GCCGGGGCCGAGATGCGTCAGGCTATGGGCGTTGCGGTGTTTGCCGGAATGCTCGGGGTGACGGTGTTTGGCTTGTTCCTGACCCCTGTTTTCTATGTGC TGATCCGTAGGCTGACGGCGCGTGTTGAGGCGTACAAAGCCAAATCGCAGCCGCGTCTGGAGGAGCGTACGTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAAGTCCCTTTCAGAATCTGTTGTTGCCGCTCAGCGCTGCTGTGCTGTTGGGCGGGTGCGCTGCGGTAGGGCCGGATTATTCTTCGCCTTCGGTAACGCC ACAGTATCCCTTCAGTTTCGGCGAGACCTCTGCAGGTCTCGGTCCGGGAGAGGTTGAAATCGAGTGGTGGCGCGCCTTTGATGAGCCGGCCCTAGTGACC TTGATTCAGCGTGCACTGGCTGCCAACCATGACATCGCCATCGCCGCCGCGCGCCTTGAAGAAGCCAAGGCCATCCTGCGCGAGAACCGTCAGGACTTTC TGCCCAGCGGCGGGCCTGCCTTCGGTTATGAGAGCTTCAAACGTAGCGACGCTGAAACACCGCTCGGACAGGAGCGGCATATCGAAACTTATCGCGCTTC AGTCGATGCCACGTGGGAAGTCGACTTGTTTGGTCGCGTACGCCGATCAGTGGAAGCGGCGCAGGCTCAAGCAGGGTCGCGTGAGGCGCTGTTGCGCGGT
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| Amino Acid Sequence |
>transporter
MTFPRFFIDRPIFAIVLSVLMMIAGVVAFFQLPLSEYPAVTPPTVQVTAAYPGANPKVIAETVAAPLEQAITGVEGMLYMSSQSATDGRMILTVTFAQDT NADMAQVQVQNRVSRVLSRLPEEVQRQGVVTQKTSPDILMVVHLLSPDKRYDPLYISNYAYLQVRDELSRIQGVSDVLVWGAGEYSMRLWLDPNLIAARG LTAGDVIAAVREQNVQVAAGSVGQAPDSTAAFQITVNTLGRLSDEEQFGDIIIRTGDNGQVTRLRDVARVEMGGDAYALRSLLDGEPAVALQIIQSPGAN ALDVAQAVRDTVQRLEGNFPAGLTSRIAYDPTVFVRASLETVATTLLEAILLVVIVVVVFLRSWRASLIPLMAVPVSLVGTFAVMHLMGFSLNTLSLFGL VLSIGIVVDDAIVVVENVERHIENGEPPTQAARRAMDEVTGPIIAITSVLAAVFIPTAFLSGLQGEFYRQFALTIAISTILSAVNSLTLSPALAGMLLRP RKAGIVRDPHSLRGRVVRVLQALGRPFQRAPGAYGNTVRKVVRVSGVALLVYVGLLGLTYFGFQAVPPGFVPMQDKYYLVGIAQLPNAASLDRTEAVVKQ MSQIALAEPGVESVVAFPGLSINGFVNVPNAAVIFVMLDPFKDRATPDLGATAIAGRLQAQFATIPDGFLGVFPPPPVPGLGATGGFKMQVEDRGGAGLE ALVQQTQILMMKATESGQLAGLMTSFDINAPQLDVVIDRTQAKSQGVKLADVFESLQVYLGSLYINDFNRFGRTYKVTAQADAEHRMQAEAIGRLQVRNE AGAMLPLSSFVTVSPSSGPDRVIRYNGYPSADITGGAMPGVSSGQAVAVMERLAKEVLPEGMSFEWTDLTYQQKLAGDSALFIFPLCVLLAYLILAAQYN SWLLPLAVLLIVPMCLLSAIIGVWLVDGDNNVFVQIGLVVLVGLAAKNAILIVEFARTLEAQGSNTLEAVIEACRLRLRPILMTSLAFIAGVVPLVLASG AGAEMRQAMGVAVFAGMLGVTVFGLFLTPVFYVLIRRLTARVEAYKAKSQPRLEERTS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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