Strain | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00012.12_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCCGAGGACGGGCTGAGCATCTCGACCAACTGGATGTCGAAGTCGCGCTCCAGGTACTCCATGCGCGTTTCGAAAAACTGCTGCATATGGGGCAGGGCC GAGTGTATGTCCAGTGCAGCCTTGCTGGCCCAGATTTCGTAGAACACGAACAGGCTCGGGTCTTCCTTGTCGCGCAGCATGTGGTATTCGATGCAGCCGG GTTCGGCACGGCTAGGCTCGACATAGGCACGAAACAGCGCCTCGAACGCTTCGGCTTTTTCCGGGCGGGTCTTGGCTTTGAGAATGAAGCCGTAGGGTTC GCTCATGAGGTGGACCTCTGGTAGGGAAGCCTGATTTTATTTCAATAATGAGTGCTAGATTCGTGCTTTTTAGTCAAAAGCCTTTTGCCTGCGAGGTGGT TTTTCCAACGCTCGCGAACCCCTAATCTGCCGCCATCCAAATTCACCCGATCCCAGCCGCCATGAGACAGCAACGGATCGAACGACAGATGAGGCAAGTG
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DNA Sequence for Gene |
>H621_RS0113980
ATGAAAAAGGTCCTGTTGCTCAACGGCGGTAAAAAATTCGCCCACTCCGACGGTCGCCTGAACGAGACCCTGCACGAGGCCGCACTGGCGTTCCTCGACC GTGCAGGCTTCGACGTCAAGACCACCTATATCGACGGTGGCTACGACAATGCCGAAGAAGTGCAGAAATTCCTCTGGGCCGATGTGATCATCTACCAGAT GCCCGGCTGGTGGATGGGCGCGCCCTGGACCGTCAAGCAGTACCTGGACGAAGTCTTCACCGCCGGCCACGGCAGCCTGTACGCCAACGATGGCCGCACC CGTTCCGATGCCTCGCAAAAGTATGGCAGCGGCGGCCTGATCCACGGTAAGCAGTACATGCTGTCGCTGACCTGGAACGCGCCGCAGCAAGCCTTTGACG ACCCCAGCGATTTCTTCGAGGGCAAGGGTGTGGATGCGGTGTACTTCCCGTTCCACAAGGCCAACCAGTTCCTCGGTATGAGCGGTTTGCCTACCTACCT GGCAGTGGATGTAATGAAGCGCCCGAACGTCGAGGCCGCCGTGGCCGCCTACGAGCAGCACCTGGCCCGGGTTTTCCAGACACCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGAGTCCTTGCGTTGGCCGCGCCAAGCGGCTATCTATCACGGCTGTTGCTCACCCCAAGGTACAGCCGTGAAAGCCAGGTCCGATGAATTGCAGGTATTC GTCTCGGTGATCGAGTGCGGCTCGATTTCCGCTGCCGCCGAGCAGGGCGGGCAGACGCCTTCGGCAATCAGCCGGACCCTGTCGCGCCTGGAGACCAAGC TGGGCACCACGCTGATCAACCGCACCACCCGGCGCATGGACCTGACCGAAGAGGGACGGTTTTTCTTCGAACGGGCCAAGTCGATCCTGCAGCAGATGGA CGAACTCGAAGAGCACCTCTCGGTGCACCACCAGACACCTTCCGGCCGCCTGCGCATCAATGCTGCCTTGCCTTTCATGCTGCACGCCATTGTGCCCTGG GTGGGCGAGTTCCGTGCGCTGTATCCGCAGATCCAGCTGGAGCTCAACACCAGCGACCTGATCATCGACCTGATCGAGCAGAGCACCGACGTCGCCATTC
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Amino Acid Sequence |
>NADPH quinone reductase MdaB
MKKVLLLNGGKKFAHSDGRLNETLHEAALAFLDRAGFDVKTTYIDGGYDNAEEVQKFLWADVIIYQMPGWWMGAPWTVKQYLDEVFTAGHGSLYANDGRT RSDASQKYGSGGLIHGKQYMLSLTWNAPQQAFDDPSDFFEGKGVDAVYFPFHKANQFLGMSGLPTYLAVDVMKRPNVEAAVAAYEQHLARVFQTPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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