Pseudomonas vranovensis DSM 16006, H621_RS0112225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGAAATCAGCCGTGACCGCGTTGAAGACGCGCGTAACGTCCTGAAGGAAGGCGAAGAGATCGAAGCCAAGATCATCAGCGTTGATCGTAAGAGCCGCGT GATCAGCCTCTCCATCAAGTCGAAAGACGATGCTGAAGAGCGTGAAGCTATCCAGAGCCTGAAAGAAACTGCTCCGGAAGCTGCTGCTGACACCACCATG GCTGCGCTGCTGCGTCAGGCAATGGCCAAACAGAACTAAGTTCTGCTTGGATAGAAAAAGGGCGACTTCGGTCGCCCTTTTTTGTGCCTGGCGTTTGGCC TTGTTCTGCTAGAGGGTGGCTCGCTGTAACCCTTGTGCTGGCTGGGTTTGTGATGATGTCGCGCGCAGAGGGGTGTTTATCCTTGACGGGGGCTACGCAA GATTCTTCGATTAAGTCAATAAGCGCCCTGTTCAAATCCCTCAGGTCATGCTAAAAACTATGAAGCAATGATCTAGCTGCTTGATAAAGAAGGGAAAAAT
DNA Sequence for Gene
>H621_RS0112225
ATGACGAAGTCGGAGCTGATCGAACGTATTGTCACCCATCAAGGGCTGCTCTCATCCAAGGATGTCGAGCTGGCCATCAAGACTATGCTTGAACAAATGT CTCAATGTCTGGCGACCGGTGATCGGATCGAGATCCGGGGGTTTGGCAGTTTCTCTCTGCACTACCGTGCACCGCGAGTAGGGCGCAACCCGAAGACCGG CCAGTCGGTGAGCCTGGATGGCAAGTTTGTACCGCACTTCAAACCGGGGAAGGAGTTGCGGGATCGGGTGAATGAGGAAGAGGCGGGTACAGATCATGGA GGCGTTGGGCGTGCATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTCAATCGCCTATTGTTGGTTTTGCTGCTGTTGCTTTTGGTTGCCCTTGTCCTGGTGTTCACCCTCGAAAACCAGCAGGTAATCAGCCTGATGTTTCTG GGGTTCGCATTGCCACCAATGCCAGTTGCTTTGCTCTTGGTAATGGCCTTGGTGTTGGGGCTCTTGCTCGGGCCGGTTCTGGGGGCATTGCTAGTGTGGC GCGCTCGTCACAAGATCAGGCAGTCAGCGCGATCCCCCCGCTAGGGGGTGGTTTCGATTCTTTCTGGTGCATAGATTTCGCGTGTCTGCGCACTGCCTCA GGGGTATTTATCCTAGCCATCGATAAGGATTCTTATTAGCGATATTGTGCTATTAGCCGACAGTCGGGGTCGCTCGTCAATGAACTATTAAGTCGCTGGT AAGTCAGAAAAGCTTGCTTTGCTGATATGTCAGTATCAGATATTCTAAGCGCGCCACACGAACTTAGTGTGTAGGTCATTTTTGGCTTGTCTTTAGGAAT
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEAGTDHG GVGRA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site