Pseudomonas vranovensis DSM 16006, H621_RS0111420
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCCGTTATCGGCCATGCGCCCCAGCGGCAAACCAGCAATGGCATACACCAGCGTAAACGCGGTGCCGATCAGGCCGATCTGGAAATCGCTCAGGTTCCA CTCCAGGCGGATCGGCTCGATGATGATGGCGGGAATGGTGCGATCAAAGAAATTGAACAGGTTGGCCAGAAACAGCAGAAACAGGATGCGCCAGGCATTG TCCGCTTGAGTGGAGCGCTGCATCGATCAGTCCCTCGTTATTATTGTGTTCGGGGCGTTGCACATGCCGAACTGAATCTAGAGGGCCATCGTTTAACTGT CTGCCACCATTGACCAGGGTGATACCGGTTAATGGGAACGATTGGCAGCGTTAGAACGCATCGCTATGAATTCAATGCCCAAATGGTAGAAGTCAAAGTG CCATTAATCAGGATGGGTTAATTCCCGCTTTCTATACTGCAGCAGAACGGTCTCCAGACTCTTTTGGGGGACGAGTGAAAACTCGACAAAGAGGCATGCT
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| DNA Sequence for Gene |
>H621_RS0111420
ATGGAGTGGCTGGGGCTACAGATGCTCGCCGAGCTGCCGGTAAGCAGTCAGATCCTTCTTGAGTGCAGGTACAACCCCTATCTGGTGACGCTTGCCCTGC TGGTCGCTGGCGCTGGCAGCTTCGCCACCCTGAGCATGGCTGAACGCCTGAACCCTGTAGACCAGCCCGCGGCCCAGCGACAATGGCGACTGCTGGGTGC CTGCTGCCTGGCCGGGGGTGTCTGGGCCCTGCATTTTATCAGCATGCTGGCCTTCCAGACCTCGATCGAGGTGCACTACGACTACGCCCTCACCGGGCTT TCACTGATGGTCATGTTGCTGGCCGGCTGGCTGGCCATGAACACGCTGGGGCATCGCAACTTGCGACCGCGTCATTTCCTGCAGGCATCCGTGTGCATCG GCCTGGGCATTTGCGCCATGCATTACATCGGCATGGCGGCCATGCGCTCCAACGCCCAGCAGTTCTATCGCCCGGACATGTTCATCACCTCTATTGCCGT GGCCATCGCTACCAGCCTGCTGGCCCTGGTGCTGGCGCGTTACTTTCGCTACGGCAGTGGCATGCTCCACCAACTGCTCAAGTACGGCGCCAGCCTGTTG ATGGCCGGAGGCATTTTCGCCACGCACTTCACCGGCATGGCCGCCATGACCCTGGTCATTCCCAATGACGCCAGCGTTACCCTGGCGGCCGGCGACAACA GTCTGCAGTTGAGCCTGACCATTGCCTTCATCACCCTACTGATCAGTGCCAGCAGCATCAGCGCGGCGTTATCCGACCAGAAGCTGCAGAGCAAGGAGCA TGACCTGCGCCGGGTCAACCTGTTGCTCAGTCAGTTGGATCAGGCCCGGGTATCGTTGCAGCAAGCGGCCCATTACGATGCCTTGACCAACCTGATCAAC CGCCGCGGCTTCAACCAGGTTTTTGCCGAGCGACTGGTCGAACAAACCACCAACGAGGGCATGCTGGCGGTCATGTTCCTCGACATCGACCACTTCAAGC GCATCAACGACAGCCTTGGTCATGACGCTGGCGACGAACTGCTCAAGGTCATTGCCGGCTATATCAAGGCGGCGACCAGGAGCCAGGATGTAGTGGCGCG TTTTGGCGGTGACGAGTTCTGCATTCTCACCGCGCTGCACAACCGGGACGAAGCCCGCCACCTGGCCCAGCGCATCATGCAGAAGATGAAAGAGCCTATC GACCTGGCCGGACGGCGCATGGTCATGACCACCAGTATCGGTATCAGCGTGTTCCCCGACGATGGCCGTACGTGCGAAGAACTGCTCAAGAATGCGGACC TGGCGCTGTATCAATCCAAAGGCTGTGGGCGCAACAACCTGAATTTCTTCAACAACACCCTCAAGGCCCGGGCCACCCTTGAGCTGCAACTGGAGGAAGA GCTGCGTGTTGCACTGCTCGAAGAGCGTGGACTACGCATCCACTACCAACCGATTTTTGATCTGCACACCGGGCAAGTGGCAAAGCTCGAGGCGCTGGTT CGCTGGCAGCATCCGCAGCATGGCCTGCTCAGCCCAGAGCGTTTCATTGGTATTGCCGAAGCCAACGGTCTGATAACCGAGCTCGACCTCTGGGTGCTGC GCCATGCCTGCGAGGATCTGGCCCATTTGAGCCGCAATGGCTATAGCGGGCTGAAGGTTACCGTCAATTGTTCAGCCCTGACCCTGGGGCGCCAAGAGCT GGCCAGGGAGGTCGAAGATGCCCTGCAACACGTCGGCCTCGCCCCGAGGCAACTGGAGCTGGAAGTCACCGAAAATGCCCTGATGGGCAACATTCACAGC ACCATTTCGATGCTCAAGGAAATCCGCGCCCTGGGAGTGTCGCTGTCGATCGATGACTTCGGCACGGGATACTCCTCCCTGGCCTACCTCAAGCGCCTGC CCCTGGACACCCTGAAGATCGATCGTTCGTTCATACAGGATGTGCCACGCAGCCGACAGGACATGGAAATCGTCCAGGCAATCATCATCATGGCCCATAC CCTGCACCTGCAGGTGGTCACCGAAGGCGTGGAAACCCTGGAGCAGTACCAGTTCCTCGCCCAGCAAGGCTGCGATTTTGTCCAGGGTTACCTGCTCAGC CGCCCGGTACCACTGGGTGAGCTGCGGGCCATTTTCGGCAAGTTTGACCAGCGCGAGCCGGTGTTGGCCAGCTTCAATCCTTACGTCGGTACAGATCAAT CAATGTCGCCGGATCTTTTTGCAGATAGCCCTGACTACCGTGCAAGCGCATCATCTGCGCGGCCAGGCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGGCGTCGCCGAGCCTTGCTCTCGGGAAAATTTCACTGCTGTGTCCAGATCCTTGAGCAACGTGCGCACGTGCCATTTGACCGGTTCAAAGCGGCTCTG GGCCATTTGCGGTGCCAGAATCTGCAAGGGCTTGGAATCGGCGAAGCCTCCGGCCAGGGCCTCGGCGATCAGGCTGGCGTCGACACCGGACTGTTCGGCC AACGCCACCACCTCAGCAATGACCAGGGCGTTGCACGCAACGATCATCTGGTTGCAGGCCTTGGTCACCTGCCCTGCCCCCACCGGCCCCATGTGCGTGA CCCGCTGGCCCAGCGTCAGCAACACCGGGCGCACCCTTTCAAGGTCTGCCGCGTTGCCCCCTACCATAATTGCCAGGCTGCCTGCCTCAGCCCCCGGCGT ACCACCGGACACGGGTGCATCCAGCCAGCTCATGCCACTGAGTGCGGCAAGCTCTGCTGCCATTTCCCGGGTCGCCGTCGGTTCCAGGCTGGAAAAGTCC
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MEWLGLQMLAELPVSSQILLECRYNPYLVTLALLVAGAGSFATLSMAERLNPVDQPAAQRQWRLLGACCLAGGVWALHFISMLAFQTSIEVHYDYALTGL SLMVMLLAGWLAMNTLGHRNLRPRHFLQASVCIGLGICAMHYIGMAAMRSNAQQFYRPDMFITSIAVAIATSLLALVLARYFRYGSGMLHQLLKYGASLL MAGGIFATHFTGMAAMTLVIPNDASVTLAAGDNSLQLSLTIAFITLLISASSISAALSDQKLQSKEHDLRRVNLLLSQLDQARVSLQQAAHYDALTNLIN RRGFNQVFAERLVEQTTNEGMLAVMFLDIDHFKRINDSLGHDAGDELLKVIAGYIKAATRSQDVVARFGGDEFCILTALHNRDEARHLAQRIMQKMKEPI DLAGRRMVMTTSIGISVFPDDGRTCEELLKNADLALYQSKGCGRNNLNFFNNTLKARATLELQLEEELRVALLEERGLRIHYQPIFDLHTGQVAKLEALV RWQHPQHGLLSPERFIGIAEANGLITELDLWVLRHACEDLAHLSRNGYSGLKVTVNCSALTLGRQELAREVEDALQHVGLAPRQLELEVTENALMGNIHS TISMLKEIRALGVSLSIDDFGTGYSSLAYLKRLPLDTLKIDRSFIQDVPRSRQDMEIVQAIIIMAHTLHLQVVTEGVETLEQYQFLAQQGCDFVQGYLLS RPVPLGELRAIFGKFDQREPVLASFNPYVGTDQSMSPDLFADSPDYRASASSARPGH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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