Pseudomonas vranovensis DSM 16006, H621_RS0109660
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCCTTGAGGGCGGCCGCGTACTGCTCGAAGCCGTCCATTTCCGCCAGCAGGCGCAAGGTCTCCTGGTGGAACAGCTCGCCCTTGCTGGTCAGGCTGAA GCCGCCTCGCCCTCGATGGCACAGCACGATGCCCAGTGCCGCTTCGAGCTGGCTCATGTAGGTGCTGATGGCCGAGGTCGAGAGGTTCAGTTCGCGCTGG GCGCTGGCGAAACCCTGGTGGCGTACCACGCTGACGAAGATACGCAGGAGTTTCAGGTCAGGCAGTGCAGAGGCCATGGAAAGCGGAGTCCGAAAGGCGG CAAGTGGCAAAAGTCTAACCAGATTCTCGGCATTAGTTTAGAAAAACATGAACTAAGTATTTGCCTGTAGCGATTCTTTTCGAGCACTACCTTTTGCAGA CTCTGCCGCAATGCACCTGTCAGCCGGCGCTTCAGGGTTTTTCCCAACCCAGGCAGACAGGTTCCAACAACTAAAACAATCGAATCGATGAGGCCCGACC
|
|
| DNA Sequence for Gene |
>H621_RS0109660
GTGGACAAGATTCTGCACCAACCACTGGGCGGCAACGAAATGCCGCGTTTCGGCGGCATCGCCACCATGCTCCGCCTTCCTCACCTGCAAAGCGCCGAGG GCCTGGACGCGGCCTTCATCGGTATCCCGCTGGATATCGGTACTTCGCTGCGTTCCGGCACCCGCTTTGGCCCACGGCAGATCCGTGCCGAGTCGGTAAT GATCCGTCCCTACAACATGGCGACCGGCGCTGCGCCCTTCGATTCGATGTCGGTGGCCGATATCGGTGACGTTGCGATCAACACCTTCAACCTGCTTGAA GCCGTGCGCATCATCGAAGAAGCCTACGACGAAATCCTCGAACACAACGTCATCCCCATGACCATGGGTGGCGACCACACCATCACCCTGCCGATCCTGC GTGCCATCCACAAGAAGCACGGCAAGGTAGGCCTGGTGCACATCGATGCCCACGCCGACGTCAACGATCACATGTTCGGCGAGAAAATCGCCCACGGCAC CACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTGGACTGCGACCGCGTGGTGCAGATCGGCCTGCGCGCCCAGGGCTACACCGCCGAAGACTTCAACTGG AGCCGCAAACAGGGCTTCCGTGTGGTCCAGGCCGAAGAGTGCTGGCACAAATCCCTCGAGCCGCTGATGGCTGAAGTACGTGAAAAGGTCGGCGGCGGTC CGGTCTACCTGAGCTTCGACATCGACGGTATCGATCCGGCCTGGGCGCCAGGTACCGGCACCCCGGAAATCGGTGGCCTGACCACCATCCAGGCCATGGA AATCATCCGTGGCTGCCAGGGCCTGGACCTGATCGGCTGCGATCTGGTAGAAGTCTCGCCCCCTTACGACACCACCGGCAACACCTCGTTGCTGGGTGCC AACCTGCTGTACGAAATGCTCTGTGTCTTGCCGGGCGTCGCGCGCCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGACAAACACCAGGGAAGCTACACAGGCAGGAGCCATGAAAGCCGGGCCGCACACGCGGCCTGAGCCGTAGACGAATGACCGGCGCCGGGCATGCCTGG CGTCAGGATCGATCTCACCATAATAAAGATAATCGGAGACACCCCCATGGCTTTGGACCTATTCGTTGTTCTGATCTATGCGGCTGGCATGCTCGCGCTG GGCTATTACGGCATGCGCCGGGCAAAAACCCATGAAGATTACCTGGTGGCCGGGCGCAACCTGGGCCCAAGCCTGTACATGGGCACCATGGCAGCAACGG TACTGGGCGGCGCCTCCACTGTTGGCACTGTACGCCTGGGCTACGTTCACGGCCTCTCGGGCTTCTGGCTGTGCGCTGCCCTGGGCCTGGGCATCATTGC CCTGAACCTGTTCCTGGCCAAACCCCTGCTGCGCCTGAAGATCTTCACCGTGACCCAGGTACTGGAGCAGCGCTACAACCCCATGGCCCGCCAGGCCAGC
|
|
| Amino Acid Sequence |
>agmatinase
MDKILHQPLGGNEMPRFGGIATMLRLPHLQSAEGLDAAFIGIPLDIGTSLRSGTRFGPRQIRAESVMIRPYNMATGAAPFDSMSVADIGDVAINTFNLLE AVRIIEEAYDEILEHNVIPMTMGGDHTITLPILRAIHKKHGKVGLVHIDAHADVNDHMFGEKIAHGTTFRRAVEEGLLDCDRVVQIGLRAQGYTAEDFNW SRKQGFRVVQAEECWHKSLEPLMAEVREKVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAMEIIRGCQGLDLIGCDLVEVSPPYDTTGNTSLLGA NLLYEMLCVLPGVARR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|