Strain | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCAGTGCAACTACCAACTTCTTCATCGATCGCTTTCCTTGTTCAGATCAAAGTAGAGAGGGGCGCCGGCGCACGTCCGGCCGCCTCAGAACTGTGTAACC CAATTGATCCGCACAAGCCAGTGGCACGGATCAGCTATTGGCGATACGGAAGCCCACCTTCAGCGTTACCTGAAAATGCGCCGCCTTGTTGTCCTTGATG TGGCCGCGCGTGTCGACTACCTCGAACCACTCCAGGTGCTTGATGCTCTTGCCGGCTTCCGCCAGTGCATTGTTGATTGCGTCTTCTATGCTGGTGGGCG ACGAGCCGACAAGTTCGATTTTCTTGTAGGTGTGGTGATCGGACATGAGCAGTCTCCTTTTCGGGTGTGAGCTTTGAGCCTAGCAGTGCAGGGCTGTTTT ACCTGCGAGGGTTGAACGCCGGAGAAAGTTCGACTGCACTTTCTGACACCTGCGAAGTCGGAACCAGAACAGCTCACTCACACCTCGAAGGAGAGTCACC
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DNA Sequence for Gene |
>H621_RS0106575
ATGGCCAACCATTCGCTGCGTAAAGCGTCGCTGCAAAGCATGGAAGCGGAGATCGAAAGCCTGCTCAAGTCATTGGAAAGCCTCAAGGACGATGCCTCGG ACGAGTCGCGCAAAACCCTGAAGACGCTCAAGGGCAACGCCGAGAACGCCTTGCGTCACTCGCGCAGCCTGCTCAGCGATGCCTACGAAGAGGTGAAGAC CAAGACTCGCCAAACCGGCCTTGCCACCCGCGATTATGCCCAGGAACACCCTTGGACCACCGCGGGTGTAGCCGTCGGCGCCCTTGGCCTGCTGGCCGCC TACCTGTTGTGCAAACGCGGCAACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGACCTGGCGCGCCAATTCGGCGCGCAACCACCCGGCCAATTGCTCGGCGCGCCCGTCTGCGGCGCGTCGCGGCACCCATAGCGCCAGCGCCGCCTGGG TCTGGCAAAAGCCCCAGGGCGCAGCCAGCCGCCCGGCACGCAGGTCATCGGCCACCAATGGCTGTGGTGCAATCGCCACGCCCAAGCCTGCCACTGCCGC TTCCAGCAAGTAATACAGGTGCTCGAAATCCTGCCCGTAGCGAAGCGACTCGGGGTCGATACCCTGTTGCTGGGCCCAACTCGGCCAGGCTTGCGGGCGT GAGGAGGTCTGCAGCAGAGTTTCCTCCAGCAGGGCCGTGGCTGGCGCCTGTTGCAGGCGGGCGAAGCCGGCAAAGTGCGGGCTGAGGACAGGGCCGATAC GCTCTTCGGCCAGTACATGCACCTGCATATCCGTTGGCCACGGCGGTTCGGCAAACACCAGCAGGGCGTCCAGCCCCGGGCGGCGCGGGTCGAGGTCACC
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Amino Acid Sequence |
>hypothetical protein
MANHSLRKASLQSMEAEIESLLKSLESLKDDASDESRKTLKTLKGNAENALRHSRSLLSDAYEEVKTKTRQTGLATRDYAQEHPWTTAGVAVGALGLLAA YLLCKRGN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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