Pseudomonas vranovensis DSM 16006, H621_RS0103595
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCACCAGGTTGGACACGTCGTGGCAGGTGGTCAGGCTGTCCAGGCGTGTTTCGGTGACGATCAGGTCGTCGCCCTGCCCCAGCCGTATCGTCAGCCAGAC ACCATCGGTGCAAGTGACTTCACAGCACTCGGGCAGAAACGCCTGCTCGATGAGCTGGCGCAGTTCAAGGGTAGAAACACCGATCAGTGACATGGTGCGA TCCTCGTGTCGGAAAGCCCGACTTCTCAGTTACCACCGCCAGGCTGGCCAAGGCCAATTGATATTGACGATGGTGCGCCGCTTGCCTCATGTACCCGGGC AATTACATGGGGTCTATCTAAGAAGAAGACTGCAGCTTGAGTGAAGTTCAGTGCACCAACCCAACTGCGCGATGAACGGAAGACCTGCGCCGTTCGTCAT CTCACGACAGATAAATTTCAAACTTTGCAGCTTCCGCGATCGCCCAACCTGTACAAGGCAACACTGCCTTGCACTTCATAGCACAGTGAGGAAGCACATC
|
|
| DNA Sequence for Gene |
>H621_RS0103595
ATGGCTAACAAAGACACTTCCAACCCCGGGAACTTCGCCAACGACCGCCAGAAAGCCTCCGACGCCGGTAAAAAAGGCGGCCAGGCTTCCGGTGGCAACG CGGGTGGCCAGACCCGTAAACCGGAAATGGGCAACAAGCCCGGCATGGGTAACAAGACAGACCGCAAGCCAAGTGGCGGCGGCCGTAGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGACGAACGACCGGCGCACCTTCGGTGCGTCGGTCTCGAGGCGCGCCGATGAGTCAGCAGGTGATTCATTTTCACTGCCAGATCGACCAGCGCACCACC GAGCGCTTTCGCGACCGGTGCCTGCAAGCCATCGACGAGGGGGCCGGCCAGCTGTTGCTGTACCTGTCGACCACCGGAGGCAGCACCAACTTCGGTTTCT CCATCTACAGCTTCATCAAGTCGCTACCCGTGCCGGTGTGCGCGGTAAATGCCGGCAACATCGAATCGATGGGCATCATCATGTACCTGGCCGCCGGTGT ACGCATTGCCGCACCGCACTCGCGCTTTCTGATCCACCCCATGACGTGGCACTTCAGCCAGAGCGCGGTAGACCACTCGCGCCTGCGGGAGTACCTGTCG AGCCTGAACAACGACCTGGAACGCTACGTCCGTATCTTCGAGCTGGAGACGCTGCAGGCCGAGCGCAAGCTGGATATCTTCCAGTGCCTGTCGGCCGAAG
|
|
| Amino Acid Sequence |
>general stress protein
MANKDTSNPGNFANDRQKASDAGKKGGQASGGNAGGQTRKPEMGNKPGMGNKTDRKPSGGGRS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|