Pseudomonas vranovensis DSM 16006, H621_RS0103505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas vranovensis DSM 16006 H621DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTTTGCCCGTCAGCCCAGAATTGCCGCCAGCGAGCGCCGTGCCCGGATCGATCACGCCATCGAGGCGGTCGGCCTGCAGCCTGCACGCGATCAGTACCCG GCACAGCTCTCCGGTGGCATGGCCCAGCGCACCGCGCTGGCCCGCTGCCTGGCGCGCCAGCCCCAGGTGCTGCTGCTCGATGAGCCGTTCGGTGCCCTGG ATGAAGTGACCCGCGCCGACATGCAGCAACTGCTGTTGCAATTGATCGCCCAGCACAACACGGCGGCGATCCTGATTACCCACGATATCGACGAAGCCCT GCTGTTGTCTGACCGGGTATTGCTACTGGGCAACCACCCGGCGCGCACCCTGGGCCAATGGCACATCGACCTGCCGCAGCCACGCGAGCAGCGGGTCGAG GAGTTGGGCGCGCTACGTATCGACATTCTCAAAACCCTTCGGCGGGCCAGCCGCACCGAACCCACACCTGAACCTTTGCCGCTGCCGTCGGAGACTGCCC
DNA Sequence for Gene
>H621_RS0103505
ATGTGCCTGGACGACTTCACCCACACTCGTCGTGATTTCATCAAACTCAGCGCCTTGCTGACCGCCGGTGGCGCCATGCCGCTGCTTAGCAGCCTGCAGG CGCGAGCCGCAAGCGATCCCGATGCGCCGGTGCGTATCGGCTACTTGCCGATTACCGACGCCACGCCGTTGCTGGTGGCGCACAACAATGGCCTGTTCGA AGCCGAAGGCATCAAGGCCGAGCGTCCGGTGCTGCTGCGAAGCTGGGCCCAGGTGATCGAGGCGTTCATTTCCGGCCAGGTCAACGTCATTCACCTGCTC TCGCCCATGACGGTGTGGGCGCGCTATGGCAGCAAGGTGCCGGCCAAGGTGGTGGCCTGGAACCATGTGGGCGGCTCGGGCCTGACCGTGGCGCCGGGCA TTGCCGAGGTCAAGCAGCTGGGCGGGCAGACCGTGGCGATTCCGTTCTGGTACTCGATCCACAACGTGGTGGTGCAGCAGTTGTTCCGCGACCATGGCCT GCAGCCGGTGTCCAAGCCTGCGACGGCGCAGATTGCGGCCAATGAAGTGAACCTGCTGGTACTGCCACCGTCCGACATGCCGCCCGCATTGGCCAGCAAG CGCATTGCCGGCTACATCGTCGCAGAGCCTTTCAATGCATTGGCAGAAGACTTGAAGGTGGGCCGGGTACAGCGCTTTACCGGGGACATCTGGCGCAACC ATGCCTGTTGCGTGGTGTTCATGCACGAACATGACTTGAACAATCGCCCGCAGTGGTCGCAAAAGGTGGTCAACGCCATCGTCAAGGCCCAGCTATGGAC CCGCGATCACCGCGCCGAGGCGGCGGCGTTGCTGTCCAAGGCCGGCCCCAATCGCTACACCCCGCATACACCGCAGGTGCTCAGCAACGTACTGGCGCCG TCTGCCGATGACCGTGCGGCCTATATCGCCAGCGGTGCAATTCAGCATGCGCAGTGGGACGAGAAGCGCATCGACTTCCAGCCTTACCCGTTCCCCAGCT ACACCGAGGAACTGGTGCGCCGTCTGCAGAACACCCTGATCGAGGGCGACAAGGGCTTTCTGGCTGGGCTGGACCCGCAGCAGACTGCCCGCGACCTGGT CGATGACCGTTTTGTGCGCAACAGCATCGAGGCGGTTGGCGGGCTCAAGGCGTTCGGCTTGCCGGACAGTTTCGAGCGCAGCGAGGAGTTTGCGATCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGGCAAGCACGCAGTTCATGGCGCCCTGGGCGCCGCCGGCTTGCTCGGCTTGTTGCTGGTGTGGTGGCTGGGTGTGCAGCTGTTCGGTGAGGCCGATGG CCTGTCGGCGCGCTTCTCGCCGCAGGCCACCCTGAGCAGCCTGATCGAGCTGCTGGGCCAGCATGAGGTGTACGAACATGCGTGGGTGAGCCTCAAGCGC ATCCTCATCGGCTTGTGGCTGGCGTTGTTGATCGGTGTGCCGTTGGGGTTGCTGGTGGGGAGCTACCGCCATCTGGAAGCGGCGACCACACCAGCGTTCC AGTTCTTGCGCATGATCTCGCCGCTGTCATGGATGCCAGTAGTGGTCATGCTGATGGGCGTGGGTGACCAGCCGATCTACTTCCTGCTGGCCTTTGCGGC GCTCTGGCCGATTCTGCTCAATACCGCAGCCGGGGTGCGCCAGCTTGACCCGCGCTGGTTGCAGCTGAGCCGCAGTTTGAGTGCGACGCGTTGGGAGACC
Amino Acid Sequence
>ABC transporter substrate-binding protein
MCLDDFTHTRRDFIKLSALLTAGGAMPLLSSLQARAASDPDAPVRIGYLPITDATPLLVAHNNGLFEAEGIKAERPVLLRSWAQVIEAFISGQVNVIHLL SPMTVWARYGSKVPAKVVAWNHVGGSGLTVAPGIAEVKQLGGQTVAIPFWYSIHNVVVQQLFRDHGLQPVSKPATAQIAANEVNLLVLPPSDMPPALASK RIAGYIVAEPFNALAEDLKVGRVQRFTGDIWRNHACCVVFMHEHDLNNRPQWSQKVVNAIVKAQLWTRDHRAEAAALLSKAGPNRYTPHTPQVLSNVLAP SADDRAAYIASGAIQHAQWDEKRIDFQPYPFPSYTEELVRRLQNTLIEGDKGFLAGLDPQQTARDLVDDRFVRNSIEAVGGLKAFGLPDSFERSEEFAI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site