Pseudomonas resinovorans DSM 21078, G559_RS0126200

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046983 protein dimerization activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00130 PAS IPR000014 PAS domain 473 561 1.52537E-4
Coils Coil Coil - - 300 320 -
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 40 261 6.2E-17
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 42 259 1.4E-23
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 41 261 1.45E-33
CDD cd16917 HATPase_UhpB-NarQ-NarX-like - - 704 788 1.67067E-31
Gene3D G3DSA:3.40.190.10 - - - 125 220 1.3E-43
SMART SM00091 pas_2 IPR000014 PAS domain 447 520 5.9
Gene3D G3DSA:1.20.5.1930 - - - 566 654 9.1E-12
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 433 565 6.63E-20
Pfam PF07730 Histidine kinase IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain 595 661 2.2E-13
Gene3D G3DSA:3.30.450.20 PAS domain - - 449 565 4.3E-17
SMART SM00086 pac_2 IPR001610 PAC motif 526 567 1.8
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 699 794 9.7E-12
CDD cd01007 PBP2_BvgS_HisK_like - - 38 258 4.5637E-50
SMART SM00086 pac_2 IPR001610 PAC motif 395 435 0.049
CDD cd00130 PAS IPR000014 PAS domain 341 431 8.78399E-7
Gene3D G3DSA:3.30.450.20 PAS domain - - 327 448 2.0E-21
Pfam PF08447 PAS fold IPR013655 PAS fold-3 477 557 7.7E-13
Gene3D G3DSA:3.40.190.10 - - - 30 257 1.3E-43
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 668 787 3.8E-19
Coils Coil Coil - - 435 455 -
SMART SM00091 pas_2 IPR000014 PAS domain 322 388 0.012
Coils Coil Coil - - 567 594 -
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 701 790 3.2E-8
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 661 795 2.7E-31
PANTHER PTHR24421 NITRATE/NITRITE SENSOR PROTEIN NARX-RELATED - - 277 792 5.8E-70
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 334 444 2.51E-22
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 328 442 6.5E-14
Pfam PF08448 PAS fold IPR013656 PAS fold-4 329 437 6.8E-9
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 473 574 1.8E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.