Pseudomonas resinovorans DSM 21078, G559_RS0125445
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans DSM 21078 G559DRAFT_scaffold00010.10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTACGTCAACTACTTCCGCTCCATCCCGCTGCTGCTGGTGATCACCTGGTTCTACTTCGCGGTGCCCTTCCTGCTGCGGGCGATCACCGGCGAAGATA CTCCGGTAGGCGCGTTCACCTCGTGCCTGGTGGCCTTCATGATGTTCGAGGCGGCGTATTTCTGCGAAATCGTCCGCGCCGGCATCCAGGCCATCCCGAA AGGCCAGATGGGAGCGGCACAGGCGCTTGGCATGACCTATGGCCAGTGCATGCGCCTGATCATCCTGCCCCAGGCCTTCCGCAAGATGACTCCGCTGCTG CTGCAGCAGAGCATCATCCTGTTCCAGGACACCTCGCTGGTTTACACCGTGGGCCTGATGGACTTCCTCAACGCCGCCCGCTCCCGTGGCGACATCATTG GCCAGCCCCATGAGTTCCTCATCTTCGCCGGCCTCGTCTACTTCAGCGTCAGCTTCATCGCTTCCCAGCTGGTCAAACTCCTGCAGAAAAGGTTAGCCGT
|
|
| DNA Sequence for Gene |
>G559_RS0125445
ATGATTTCCATCAAGAACGTCAACAAGTGGTATGGGGACTTCCAGGTGCTGACCGACTGCAGCACCGAGGTGAAGAAAGGTGAAGTCGTGGTGGTGTGCG GCCCGTCCGGCTCGGGCAAATCCACCCTGATCAAGTGCGTGAACGCCCTGGAGCCCTTCCAGAAGGGCGACATCGTGGTCGACGGTACTTCCATCGCCGA CAAGGCCACCAACCTGCCCAAGCTGCGCTCCCGCGTCGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGTCCATCACCGAGAACCTCACCATC GCCCAGACGAAAGTGCTCGGCCGTGGCAAGGACGAAGCCATGGACAAGGGCCTGAAGCTGCTCGACCGCGTCGGCCTCAAGGCCCACGCCCACAAGCACC CCGGCCAGCTCTCCGGTGGCCAGCAGCAGCGCGTCGCCATTGCCCGCGCCCTGGCCATGGACCCGGTGGTAATGCTGTTCGACGAGCCCACTTCGGCGCT GGACCCGGAGATGGTCAACGAAGTGCTCGACGTGATGGTCGAGCTGGCCCAGGAAGGCATGACCATGATGTGCGTGACCCACGAGATGGGCTTCGCCCGC AAGGTCGCCGACCGGGTGATCTTCATGGATCGCGGGCAGATCGTCGAAGACTGCGCCAAAACCGAGTTCTTCGGGGACGTCAACGCCCGCTCCGACCGCG CCCAGCAGTTCCTCGCGAAGATCCTCCAGCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGCACCTGTAGGAGCGAGCTTGCTTGCGAATGGCCCCGAGCACTTCGCCAGCAAGCTGGCTCCTACGGCCCCACTCCACCATTCGGCACCCGCACGCGGT ACCGACTGGAACGGCCCGGATGTCTATGATGCAATGCCCTACCGCCAGCCTCCGCGCCGTGCCGCCCGCATTGACCGTGAAACCGCGCCTGCTTCGCCAC TCCCTGCTATTCCTGCTGCTGCTCCTGTGCATGCTGGGCTTCGGCTACGTCGGCTATCACCTCAGTGAGGAGTCGGGCATCCGTCAACTGCGGGATAACG GCGAGCGCCAGCTGGAACTCCACGCCCGCGCCGTGGAAAGCGAGATCAACCGCTACACCTACCTGCCCAGCCTGCTGGAGCTGGAGTCCAGCGTCAGTCA CCTGCTGCTCAACCCCACGCCCTATCGGCGCAATCTGGTCAACGACTACCTCGAAGGCCTGAATCGCAGAAGCGGCGCCCGCGCCATCTACCTGCTGGAC
|
|
| Amino Acid Sequence |
>amino acid ABC transporter ATP-binding protein
MISIKNVNKWYGDFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGDIVVDGTSIADKATNLPKLRSRVGMVFQHFELFPHLSITENLTI AQTKVLGRGKDEAMDKGLKLLDRVGLKAHAHKHPGQLSGGQQQRVAIARALAMDPVVMLFDEPTSALDPEMVNEVLDVMVELAQEGMTMMCVTHEMGFAR KVADRVIFMDRGQIVEDCAKTEFFGDVNARSDRAQQFLAKILQH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|