Pseudomonas resinovorans DSM 21078, G559_RS0119445
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans DSM 21078 G559DRAFT_scaffold00024.24_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGAGGTGGGCATGCACGCGACCCAGGTGGTGTTCCTCGCCCGAGGCAACCCGCCGTTCATGCTGGCCCTGGGCAATCTCGAAGCGAGCCGCACGGAACTG CCCCTGGCTACGCTGGTGCCGGGTTTCGACCGTTCCAGCCTGGCGAAGATGGGGCAGGCCGACGCGGTGGCACTACCGCCGCAAACTGGCGTGCATCCGG CGGAGCGGCAGACCGCAGGGCAGATCGTCTGGAAGCGTGTCGGGCTCTGGGCGGTGTTGCTGCTGGGCGTTGGTCTGTTGGGCGCCATGGCCTTCAGCCT GTTGCGACGGCCAACGGCGCGATCCTGAGTATCGACGGAAGACCCTACGGTAGTAGTGGCTTTTTGATGTATCTTTGTTCTGTGTTTTCTGGGGCGGCAA CCTGCCGTCCCAATGCCAGGTCAGGACGGCCAGTGCTCAGCTTTCAGCAGTTCTCTCCAGATTCCGCCTCGCCGCTTGCCGCGCTCCTCGGAGCCTGGCG
|
|
| DNA Sequence for Gene |
>G559_RS0119445
ATGAACGCCTGCCTGGCCAGTGGCTGGAGCCTCAACGGTCCGGTGGCGCTGACCATCGCCGTTGGGCTGGGGGTCATGCTCATGGCGCGCTGGGTCAGCC GCCAGCGCCATTTCCCCGGCCGCGAAAGCTTTATCGTCCTGCACTTCGGGATTTGCTGGTGGCTGGCCGCCGCAGGTCTGGAACTGGCCGCGCAGGGCCC GCAGTGCAAGGTGTTCTGGGCCAGCATGGCGTGGCCCGGCATCATCGGCGTGCCAACGTTCTGGGCCGTCTTCCTCTGGCAGTACGTCAACAGCATCCGT GAACCTTTGAGCCTGCGCGGCTTCCTGCTGCTGGGCATCGGCCCGCTGGTGGCTTCCGGCATGGCGTTGAGCAATCCCTGGCATCAGCTGTACTACGGAC CCGGCACCCTGCCGGTGGACGACTTACCCGGCGCGGCGATCCGCTATGACCATGGCCCGCTGTTCAATGCCGTGGCCATCTACGTCTATGTCTTCATGGT TTTCTGCCTGGCCGTGGTGACCCGTGCGGCCCTGGCCAGCCATGGCCTCCATCGGCGGCATTATCTGGCCTTCGTGCTGGTTACCTGCGTGCCCTGGGGC GCCAACCTGAGCTATGTGGTCTACGGCTGGACGCTGTTCGGCTTCGACCCCACGCCCTTCAGCTTCGCCTTCACCCTGGTGGCGTTTGCCTGCCTGATTC TCGGCGTGCGCCTGTTCGATATGTTGCCGGTGGCGCGTCACCTGCTGCTCGAGGAGTTGCCCGACCCGGTGCTGGTGGTCGACCCCAGGCGTCGGGTGAT CGACGCCAATCCCGCCGCCCTGGCGCTGGCCGGGCAGCCAGCGGCCTGGCAGGGCATGGTGCTGGCCAAATGGCCGGTGTACGGCGTGGAGCTGGAGGCA ATGCTGACGGCCGGGGAGAGGGAGATGTTGCTGGTTCCGGCCAGTTCCTCGCGCTATTTCGAAGTGCGTTCCCGTGATATCGAGCGGGTTACCCGGGGTG GCACCTTCATCCTCGGGCAGATGCTCTACCTGCGCGACATCACCGAGCGCCATTGCAGCGAACTCAAGCTGGCCGAGGCGCTCGCCACCAGCGAGGAGCG CCTGCGTACCATCACGCGCCTGCACGAACAATTGCAGGAGCAGGCCCTGCGCGACCCGTTGACCGGCCTGTACAACCGCCGCCATCTGGGTGAGCTGTTC GCCCGCGAGCTTGCCCGCAGCCAGCGCGAACGTACGCCCATCGCCCTGGCGCTGATTGACCTCGACCATTTCAAGCAGCTCAACGACCGTCATGGCCACC TGGTCGGCGACGACGTGCTGCGTGCGGTGGCCATCCACCTGACCGGCAACCTGCGTGGCAGTGATGCGGTGTTCCGCATTGGTGGCGAGGAGTTCCTGTT GTTGCTGCCCGGTGCCACGGGCGAGGAGGCTTTCGCCCGGCTGCAGGTGCTCTGCCAGGCGCTGGCCGGCCAGCCGCTGCCTACCCGCGAGGGGCCGCTG TCGGTGACCCTGTCCGCCGGGCTGGCGGTCTGGCCAGTCCAGGGGCAGACGCTGGAAGAGCTGATGCAGGTGGCCGATGCCGGCCTCTACGAGGCCAAGC GCAACGGCCGTAACCAGGTGTGGAGGATGGCGGCGCCTGCTGCAGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGCGGAACCCGTCGAAATCCTTGTCGTCAGATGAATCCATAGCCCTTGCGGGCTGCCGCCGCAGGCCGTTTCAGCACCTTCCATCCCGCTGAGAGGCAT TGCGAATCGAGTCGCGCTAAACTGCGCGCATTTTTCCACCCTCCGGAGCCATTCCATGTCCCGCGTTACCCTGAGTCGCTACCTGATCGAGCAGACCAGA AGCCACAACACCCCTGCCGATCTGCGCTTCCTCATCGAGGTTGTCGCGCGCGCCTGTAAGGAAATCAGCCATGCGGTGTCCAAGGGCGCGCTGGGCGGCG TGCTCGGCAGCATGGGCACCGAGAACGTGCAGGGCGAGGTGCAGAAGAAGCTGGACGTGATGTCCAACGAGATTCTGCTGGAAGCCAACGAGTGGGGCGG CCACCTGGCCGGCATGGCCTCCGAGGAAATGGACAACGCCTACCAGATCCCCGGCAAATACCCGAAGGGTGCCTACCTGCTGGTGTTCGACCCGCTGGAC
|
|
| Amino Acid Sequence |
>diguanylate cyclase
MNACLASGWSLNGPVALTIAVGLGVMLMARWVSRQRHFPGRESFIVLHFGICWWLAAAGLELAAQGPQCKVFWASMAWPGIIGVPTFWAVFLWQYVNSIR EPLSLRGFLLLGIGPLVASGMALSNPWHQLYYGPGTLPVDDLPGAAIRYDHGPLFNAVAIYVYVFMVFCLAVVTRAALASHGLHRRHYLAFVLVTCVPWG ANLSYVVYGWTLFGFDPTPFSFAFTLVAFACLILGVRLFDMLPVARHLLLEELPDPVLVVDPRRRVIDANPAALALAGQPAAWQGMVLAKWPVYGVELEA MLTAGEREMLLVPASSSRYFEVRSRDIERVTRGGTFILGQMLYLRDITERHCSELKLAEALATSEERLRTITRLHEQLQEQALRDPLTGLYNRRHLGELF ARELARSQRERTPIALALIDLDHFKQLNDRHGHLVGDDVLRAVAIHLTGNLRGSDAVFRIGGEEFLLLLPGATGEEAFARLQVLCQALAGQPLPTREGPL SVTLSAGLAVWPVQGQTLEELMQVADAGLYEAKRNGRNQVWRMAAPAAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|