Pseudomonas resinovorans DSM 21078, G559_RS0114670
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans DSM 21078 G559DRAFT_scaffold00014.14_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCGCCAGAAGTGGATCGATCAGGCCCAGTCCCTGAACCTCTACATCGCCGGCGCCTCCGGCAAGAAGCTGGACGTGACCTACCGCATGGCTTGGTAC CGTGGCCTGAAAACCACCTACTACCTCCGCGCCCTGGCCGCCACCAGCACCGAGAAGTCGACCATCAACACCGGCAAGCTGAACGCCGTATCCGCAGGTG GCAGCGAAACCCTGCAAGCCGCTCCTGCTGCAGCGCCGGCACCGGCTCCGGTGCCCAGCGCGTGCTCCATCGATAACCCCGACTGCGAAGCGTGCCAATA AGGCATCGCACGGGGCCGCTCCCTCCCCTCTCCCTCTGGGAGAGGGGCCGGGGGTGAGGGAAAACTCATCCAGCACCGATATCCGAACAGCCACACCCAC AAACCGGGTGTGCACAAGCCAGGGCAATTCACCGCCCGGCCATGAACCACCGCTTTAGCGTGCACCGTCATTCACGCATCCAGATACCAGGAGAGGAACC
|
|
| DNA Sequence for Gene |
>G559_RS0114670
ATGCTCAGCTGGGACGAATTCGACAAAGAAGACCCCACCGAAGCCAAGGCAGCCCCCGCTGTTGCCCAGGCCGCCGCCAAGAACATCGACAAGCTCGACG ACGAAGCCGCCGGCTCCGTTGAAGACGCCCGCGCCGTATCGGCCGACGACTCCGACGCCGTCGCCCGCGCCAAGAAGGCCCTGGACGCCCTCGACATCCA GGAAGGCCTGGACGACCTCGAAGGCTCCGCCGCGCGCGTACAGGTTGGCGACAAGCAGATGATCAACGCCCGCGCCGACCTCAACCAACTCGTACCCTTC AAGTACGACTGGGCCTGGCAGAAGTATCTGGATGGTTGCGCCAACCACTGGATGCCGCAAGAAGTGAACATGAACGCCGACATTGCCCTGTGGAAGAGCA AGGACGGCCTCTCCGAAGACGAGCGCCGCATCGTGATGCGCAACCTCGGCTTCTTCTCCACCGCCGACTCCCTGGTTGCCAACAACCTGGTGCTGGCCGT GTACCGCCTGATCACCAACCCCGAATGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAAGCGATCCACACCCACGCCTACCAGTACTGCATCGAGTCG CTGGGCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATTCCCAGCGTCGCGAAGAAAGCGTCCTGGGGCCTCAAGTACACCCGCTCGATCTCCG ACCCCGAGTTCAAGACCGGCACCCCGGAGACCGACCGCCAGTTCCTGCGCAACCTGATCGCCTACTACTGCGTACTGGAAGGCATCTTCTTCTACTGCGG CTTCACCCAGATTCTCTCCATGGGCCGCCGCAACAAGATGACCGGCACCGCTGAGCAGTTCCAGTACATCCTGCGCGACGAATCCATGCACCTGAACTTC GGCATCGACGTGATCAACCAGATCAAGATCGAGAACCCGCACCTGTGGGATGCCCAGATGAAGGACGAAGCCACCCAGATGATCCTGCAGGGCACCCAGC TGGAGATCGAATACGCTCGCGACACCATGCCGCGCGGCGTACTGGGCATGAACGCCGCGATGATGGAGGACTACCTCAAATTCATCGCCAACCGCCGCCT GACCCAGATCGGCCTGAAAGAGGAATACCCGGGCGCGACCAACCCGTTCCCGTGGATGTCCGAAATCATGGACCTGAAGAAAGAAAAGAACTTCTTCGAG ACGCGCGTCATTGAATACCAAACGGGTGGCGCACTGAGCTGGGATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCCGGGTCACGTAGTTTTTCAACAAACACTGAAACTTTTTCACTGAATGTTGAAACGAATGCACCGAGACGGTGCAGAGCCGCTGCCTGGGGAGGCAGC GGTGCCAGCCATCCAAGGGTGGCTTTGGTAACAGGGCAAGGCCATTAGCCCCAAAGGAACTGGGGTAGAAAGGAGTAAGAGAAAGGGCCGGTGAGCGTTG CTCACTGGCCCTTTTCTTTGGATGGAATATCCGCTATCGGCCGATTCTGTTGAAAAAATCCCTCTGCGATTTCGGCCAATCAAAGAGCCCTTGATCAGTC GGTCAATCTGTTACAACAGCTCCAAGGCCTTTTACGCGGACAGGCCGAACAAAGCCGAAGGCATGTAGAGCAGGTCGCTCTCGTCCATCGGCGGGAGAAA CTCCCCACCCAGCTGCAAAATCGCCAGAACGTGGCCAGGAAAGCCTACAGGGATACCACTAGGTTTGTCGTCGAATGTCGCAGAACGGCATCCAGGGCCG
|
|
| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDPTEAKAAPAVAQAAAKNIDKLDDEAAGSVEDARAVSADDSDAVARAKKALDALDIQEGLDDLEGSAARVQVGDKQMINARADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMNADIALWKSKDGLSEDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPEFKTGTPETDRQFLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGTAEQFQYILRDESMHLNF GIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGATNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|