Pseudomonas resinovorans DSM 21078, G559_RS0105680
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans DSM 21078 G559DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCTGCACGATATCAGCCTGGGTGGGGTGGCATGCAACTCCACCCGTGCGTTTCGGCGCGGCACCGCGATAGAACTCTGCATCCCCTTGCTGGGCGATCA GGCCCGTTTTTTCGGGGCAGTGGCCTGGTGCCGCAAACTGGCCGAGGACTACATGATCGGCATCGCCTTCACCGATGAGGAAAACATGTTCCGCGCACGA ATGGTGGAGCAGATCTGCCTGATCGAGCAGTACCGCAAGCAACGCGAGGCATCCGTTGGCCACGCCTTGGCACCAGAGGCCGTGGCACAGGAATGGATCG CCCTGCACGCTGCGGACTTCGCCCCCGTCTGAAATCGTGCAAATTCCACGTCCGGCGCGTGCATTCGCCATTGTCGAGGCTGCGTGGAAAGCGTTAAGGT TCCCGTCCCCGCCGCGTTTTTACTGCTGTGCTCTCCGCCATACGGGGATCGCTGGCGGCCTGCACCCGTGACCTGACGACCCTGAACGATGAAAAGCACG
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| DNA Sequence for Gene |
>G559_RS0105680
ATGGCTGATTTACAGATCGACGACCTTAACGTTGCCTCCAACGAGACCCTGATCACGCCGGAGCAGTTGAAGCGCGAAATTCCCCTGACCGATGAAGCAC TGAACACCGTCGCCAACGGCCGCCAGGTGGTCCGCAACATCCTCGATGGCAAAGACCATCGCCTGTTCGTAGTCGTGGGCCCCTGCTCCATCCACGACAT CAAGGCTGCCCACGAGTATGCCGATCGCCTCAAGGTCCTGGCCGCCGAGGTGTCAGACACCCTCTTCCTGGTCATGCGCGTGTACTTCGAAAAACCGCGC ACCACCGTCGGCTGGAAAGGCCTGATCAACGATCCGTACCTGGATGACTCCTTCAAGATCCAGGATGGCCTGCACATTGGCCGCCAGTTGCTGCGCGACC TAGCCGAAAAAGGCCTGCCCACCGCCACGGAAGCCCTGGACCCGATTTCCCCGCAGTACCTGCAGGACCTGATCAGTTGGTCGGCCATCGGCGCCCGCAC CACCGAATCCCAGACCCACCGCGAAATGGCTTCCGGCCTGTCTTCCGCCGTCGGCTTCAAGAACGGCACCGATGGCAGCCTGACCGTGGCGATCAACGCC CTGCAGTCCGTTTCCAGCCCGCACCGCTTCCTGGGTATCAATCAGGAAGGCGGCGTTTCCATCGTCACCACCAAGGGTAATGCCTATGGCCACGTGGTCC TGCGCGGCGGCAACGGCAAGCCGAACTACGACTCGGTCAGCGTTGCCATCTGCGAGCAGGAGCTGAGCAAGGCCGGCATCCGTCCGAACGTGATGGTTGA CTGCAGCCACGCCAACTCCAACAAGGACCCGGCCCTGCAACCTCTGGTCATGGACAACGTCGCCAACCAGATTCTGGAAGGCAACAACTCCATTGTCGGC CTGATGGTGGAAAGCCACCTCGGCTGGGGCAGCCAGTCGATTCCGAAAGACCTCGACCAGCTGAAGTACGGCGTTTCCATCACCGACGCCTGCATCGACT GGGACACCACCGAGAAAGCCCTGCGCAGCATGCACGCCAAGCTCAAGGATGTGCTGCCCAAGCGCCAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGACAGCTGGAAACGAAAACGCCGGGCAAATGCCCGGCGTTTTTCATTGCGCGCCTATTCAGCCATTCTGGTGGGACTGACGCTGGCGGCGCTCGATAT AGCGTTCGACATAGGAGCAGGATGGGATCACGGTGTAACCATGATCCTCGGCAAATTCCAGGGCTGATTCAGTCAGCGCCGCGGCAATCCCGCGACCACG CAGGACGTTCGGCACGAATGTGCGATAGATGTCCAACGTCTGTTTACCCAGGTCCATATAGGCCAGGTATGCACGATGACCGTCCACGGTGGTCTCGAAC TGATGACCTGCCTGGTCATGGTGGATGGACAATGCCTCGCTCATCACTACTCCTCTGAGGGGTCTAAAACCTGACCCGTACCTTATCTATCTTTTCCAGC CGAAGGAACATCTCAGCCGTGCCGGAACCGAACTGCACACTGAGATACGCCTTCCCGTTCTCCACCTTGTGTAATACACCCTGGTAATAGGCGCCATCGA
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| Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLQIDDLNVASNETLITPEQLKREIPLTDEALNTVANGRQVVRNILDGKDHRLFVVVGPCSIHDIKAAHEYADRLKVLAAEVSDTLFLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLRDLAEKGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGSLTVAINA LQSVSSPHRFLGINQEGGVSIVTTKGNAYGHVVLRGGNGKPNYDSVSVAICEQELSKAGIRPNVMVDCSHANSNKDPALQPLVMDNVANQILEGNNSIVG LMVESHLGWGSQSIPKDLDQLKYGVSITDACIDWDTTEKALRSMHAKLKDVLPKRQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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