Pseudomonas resinovorans DSM 21078, G559_RS0104340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0016539 intein-mediated protein splicing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00379
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004519 endonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF14528
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.170.16.10 Hedgehog/Intein (Hint) domain - - 326 438 1.1E-15
Gene3D G3DSA:3.20.70.20 - - - 7 325 1.7E-78
SUPERFAMILY SSF51998 PFL-like glycyl radical enzymes - - 102 1031 1.99E-130
SUPERFAMILY SSF55608 Homing endonucleases IPR027434 Homing endonuclease 532 645 1.08E-13
CDD cd00081 Hint - - 323 420 2.71733E-8
PANTHER PTHR43371 VITAMIN B12-DEPENDENT RIBONUCLEOTIDE REDUCTASE - - 20 1043 0.0
PRINTS PR00379 Intein signature IPR006142 Intein 379 392 2.4E-16
Gene3D G3DSA:3.10.28.10 Homing endonucleases IPR027434 Homing endonuclease 527 653 2.7E-18
PRINTS PR00379 Intein signature IPR006142 Intein 436 448 2.4E-16
PRINTS PR00379 Intein signature IPR006142 Intein 540 552 2.4E-16
PRINTS PR00379 Intein signature IPR006142 Intein 571 586 2.4E-16
SUPERFAMILY SSF51294 Hedgehog/intein (Hint) domain IPR036844 Hint domain superfamily 322 694 1.92E-33
Pfam PF14528 LAGLIDADG-like domain IPR004860 Homing endonuclease, LAGLIDADG 538 633 9.9E-24
Pfam PF02867 Ribonucleotide reductase, barrel domain IPR000788 Ribonucleotide reductase large subunit, C-terminal 104 1022 0.0
PRINTS PR00379 Intein signature IPR006142 Intein 689 698 2.4E-16
PRINTS PR00379 Intein signature IPR006142 Intein 671 688 2.4E-16
SMART SM00306 hint_7 IPR003587 Hint domain N-terminal 321 421 8.5E-7
Gene3D G3DSA:3.20.70.20 - - - 683 1037 6.1E-85

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.