Pseudomonas resinovorans DSM 21078, G559_RS0104285
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans DSM 21078 G559DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGGGCGGCTGGGTCAGCTCCAACTATGCAGCGGTAGCCTGCGTCGACCTGCCCACCTGCCACGGCGAGTGGTGGCCAGCGATGGACTTCGCCAATGGTT TCCACCTGACTCAGCACATCGGCCCCAACTACCTGGGCGGCCAGCTCGACAGCGACGCCCGCACCGCCATTCACATGACTCACCGCCTCGGTGCGCTGGT CGTGACCCTCGTGCTGCTGGGTGTTGCCTGGCAACTCCATCGCAATGGACTGTCGCGACTGGCCGGACTGCTGCTGGCGGCACTCTGCCTGCAGGTGGGG CTGGGCATCAGCAATGTGCTGTTCCATCTGCCGCTGCCGGTGGCGGTCGCCCACAACGGCGGTGGCGCCCTTTTGCTGCTGGTGTTGGTTTCAGTGAATT ACCGGGTGCGTGCACCGGCGCCGGCCGCCGACACGTCCGCTACGGCTGCTCGGCATCACGCCGGCAAGCCTGCCTGAACACAAGAAGAAGGAGAGACGCC
|
|
| DNA Sequence for Gene |
>G559_RS0104285
ATGGCCACTCTGCTCAGCCGAGGACACAGCCAGGCCCACGCCAGCTGGCGCGACTACCTGGAGCTGACCAAGCCCAAGGTAGTGGTGCTGATGCTGATCA CCTCGCTGGTGGGCATGTTCCTCGCCACGCGCGCCGGCGTGCCCTGGACGGTGTTGCTGTTCGGCAACCTCGGCATCGGCCTCTGCGCGGGCGCAGCAGC GGCGGTCAACCATGTGGTGGACCGGCGCATCGATTCGATCATGGCGCGGACGCTGAAGCGCCCGGTGGTGAATGGGCGTGTCTCGCCGGTCGCGGCCCTG GCGTTCGCCTTCATCCTGGCGCTCGTCGGCCAGGCCCTGCTGCTGGCCTTCACCAACGAACTGACGGCCTGGCTCACCCTGGCTTCGCTGGTGGGTTATG CGGTGCTCTACACCGGCTTCCTCAAGCGCGCCACGCCGCAGAACATCGTTATCGGCGGCCTGGCCGGCGCCGCACCGCCGCTCCTCGGCTGGGTAGCGGT CACCGGCCACCTGTCCGCCGAACCGCTGCTGCTGGTACTGATCATCTTCGCCTGGACCCCTCCGCACTTCTGGGCGCTCGCCATTCATCGCAAAGAGGAA TACGCCAAGGCCGATATCCCGATGCTGCCGGTGACCCACGGTGAGCACTACACCAAGGTGCACATCCTGCTCTATACGCTGGTGATGTTCGCGGTGAGCC TGCTGCCCTATGCCATCCACATGAGCGGCGTGCTCTATCTGGTTTGCGCGGTGGCCCTGGGTGCGCGCTTCCTGCAATGGGCCTGGGTGCTGTACCGTGA CAGCAGACCGCACGCCGCGATCAAGACCTTCAAGTACTCTATCGCCTACCTCTTCCTGCTGTTCATCGCCCTGCTGGTGGACCACTACCTGATGCTGAAC CTATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCGAATCCAGAAAACCGTCTTCGTCCTCGTCGCCCTGGTTGCCGTGGTGCTTGGCCTCACCGTGCACAAAGTCCTGACCGGCCAGGCTCAGGCCGACCC GACCAAATTGCTCGATGCCGGCATCGTCCTGCTGCCGCAGAGCCGCACCCTGCCGGAACTGGAAATGACCAACCAGGACGGCGAAAAGATGCGCGTCGAC CAGTTCAAGGACAAGTGGAGCCTGGTGTTCTTCGGCTACACCTTCTGCCCGGACATCTGCCCCACCACGCTGGCGCAAATGCGCGAACTCAAGGGCCTGC TGCCGGAGGAGGCGCGCAACAACCTGCAGATCATCCTCGTCAGCGTCGACCCCTACCGCGACACGCCGCAGCAGCTCAAGCAGTACCTGGGCTACTTTGA CCCGGCCTTCATCGGCCTGACCGCCGACCTGCCGACCCTGCAGAAACTCTCCAATGCGGTAAGCATCCCCTTCATCCCGGCTGACACCAGCAAGGAAAAC
|
|
| Amino Acid Sequence |
>protoheme IX farnesyltransferase
MATLLSRGHSQAHASWRDYLELTKPKVVVLMLITSLVGMFLATRAGVPWTVLLFGNLGIGLCAGAAAAVNHVVDRRIDSIMARTLKRPVVNGRVSPVAAL AFAFILALVGQALLLAFTNELTAWLTLASLVGYAVLYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVTGHLSAEPLLLVLIIFAWTPPHFWALAIHRKEE YAKADIPMLPVTHGEHYTKVHILLYTLVMFAVSLLPYAIHMSGVLYLVCAVALGARFLQWAWVLYRDSRPHAAIKTFKYSIAYLFLLFIALLVDHYLMLN L
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|