Pseudomonas resinovorans DSM 21078, G559_RS0103400
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans DSM 21078 G559DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCACACCCTCTATCGAGGCGATAGCTGGCCTCTCGGCCGGCCTTGGGCCAGACTCCACCCTGGAAGCGCTGAAAATCGGCGCTTCCCTAATTGCTGGC GATTTTTTAGACTATCCAGTCCGCTCGCCCATTCGGGCACCGTATCAGCCATTCATTTCGTGCTACGAGGAACACCATGGCCCGCGTTACCGTTGAAGAT TGCCTGGACAACGTTGATAACCGCTTCGAGCTGGTCATGCTCGCCACCAAGCGTTCCCGTCAGCTGGCCACCGGCGGCAAAGAGCCGAAGGTAGCCTGGG AAAATGACAAGCCGACCGTAGTCGCCCTGCGCGAAATCGCTGCCGGCCTGGTCGATTACGACGTCATCGCCCAGGAAGACATCGTTGAAGAAGAGCCGCT GTTTGCCGCATTCGAGGACGAGGCCAACGAGGCCCTCTGAATCCATGCCCGGTCGACGTCGCACGGCACAGGGTAGAGAAGGTCGGCAAGGAGAAGAATC
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| DNA Sequence for Gene |
>G559_RS0103400
TTGCCGAGCATAGACGCCCTTGCCGAACGACTTTCGACCTATCTCGGCGCCGACCAGGTCAACCTGGTGCGCCGAGCCTACTTCTATGCCGAGCAGGCCC ATGATGGCCAGCGCCGGCGCAGCGGCGAAGCGTACGTTACTCACCCGCTTGCCGTAGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGAT GGCCGCGATGCTGCATGACGTGATCGAGGACACCGGTATCGCCAAGGAAGCCCTCAGCGGGCAGTTCGGCGAGACCGTTGCCGAGTTGGTGGACGGGGTC AGCAAGCTGACCCAGATGAACTTCGAGTCCAAGGCCGAAGCCCAGGCCGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGATATCCGCGTGATCC TGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGCTGTCCGGCGAGAAACGCCGGCGCATCGCCAAGGAAACCCTGGAAATCTACGC CCCCATCGCCAACCGGCTGGGCATGCACAGCATGCGCGTGGAGTTCGAGGACCTTGGCTTCAAGGCCATGCACCCGATGCGCTCCGAGCGTATTCGCACT GCTGTCCGCCGCGCCCGCGGCAACCGCAAGGAAATCGTCAACAAGATCGAGGAATCGCTGACCAACTGCCTGCGCCGCGAAGGCATGGAAGGCGAGGTCA TCGGCCGCGAGAAGCACCTCTACAGCATCTACAAGAAGATGCGCGGCAAGCGCCGGGCGTTCAATGAAATCATGGACGTCTACGCCTTCCGCATCATTGT CGACAAGGTCGACACCTGCTACCGCGTGCTCGGCGCCGTGCACAACCTGTACAAACCGCTGCCCGGTCGCTTCAAGGACTACATCGCGATTCCCAAGGCC AATGGCTACCAGTCGCTGCACACCACGCTGTTCGGCATGCACGGCGTGCCCATCGAGATCCAGATCCGCACTCGCGAAATGGAAGAGATGGCCAACAACG GCATCGCCGCCCACTGGCTGTACAAGTCCGCCGAGGACGACCAGCCCAAGGGCACCCACGCCCGCGCCCGCCAGTGGGTCAAAGGCATCCTGGAGCTGCA GCAACGTGCCGGCAACTCCCTGGAATTCATCGAGAGCGTGAAGATCGACCTCTTCCCCGACGAGGTCTACGTGTTCACGCCCAAGGGCCGCATCATGGAG CTGCCGAAAGGCTCCACCGCGGTCGACTTCGCCTACGCGGTGCATACCGACGTCGGCAACACCTGCATTGCCTGTCGCATCAACCGCCGCCTGGCGCCGC TGTCCGAACCGCTGCAGAGCGGCGAGACCGTGGAGATCGTCACTGCGCCGGGCGCCAGGCCTAACCCGGCCTGGCTCAATTTCGTGGTCACCGGCAAGGC ACGCACCCATATCCGCCACGCCCTCAAGCAGCAGCGCCGCTCCGAGTCCATCAACCTCGGCGAACGACTGCTGAACAAGGCCCTGGCCGGCTTCGAGAGC CACCTGGACAAGATCAGCCCCGAGCGTATCCAGGCCGTTCTCGGCGAATACCGCCTGGACGTGATCGAAGACCTGCTGGAAGACGTCGGCCTTGGCAATC GCATGGCCTACGTCGTCGCCCGCCGCCTGCTGGCCAGTGATGGCGAACAGTTGCCGAGCCCCGAGGGTCCGCTGGCGATCCGCGGCACCGAGGGCCTGGT GCTGAGCTACGCCAAGTGCTGCACGCCGATCCCCGGCGACCCCATCGTCGGCCATCTTTCTGCCGGCAAGGGCATGGTGGTGCACCTGGAAAGTTGCAAG AACATCGGCGAAATCCGGCACAACCCGGAGAAATGCATCCAGCTGTCGTGGGCCAAGGACGTCGCAGGCGAATTCAACGTCGAACTGCGCGTCGAGCTGG AACACCAGCGCGGCCTGATCGCCCTGCTGGCCAGCAGCGTCAACGCCGCCGACGGCAATATCGAGAAAATCAGCATGGACGAGCGCGATGGCCGCATCAG CGTGGTCCAACTGGTGGTCAGCGTACATGACCGTGTACACCTGGCCCGCGTGATCAAGAAGCTGCGTGCGCTCAAGGGGGTGATCCGCATCACCCGCGTG CGGGCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGATCCCAAGAAACCCAAGGAGTTCTCATGAGCAAGACCGTCATCAGCAGCGACAAGGCCCCCGCCGCCATCGGCACTTACTCCCAGGCCATCAAGGCC GGCAACACCGTCTACCTGTCCGGCCAGATCCCGCTGGACCCGAAGACCATGGAACTGGTTGAAGGCTTCGAAGAGCAGACCGTGCAGGTGTTCGAGAACC TGAAGGCCGTGGCCGAAGCCGCGGGCGGCTCCTTCAAGGACATCGTCAAGCTGAATATCTTCCTCACTGACCTGTCCCACTTCGCCAAGGTCAACGAAGT CATGGGCCGCTACTTCGAGCAGCCCTACCCGGCTCGTGCCGCCATCGGCGTTGCCGCCCTGCCGCGCGGCTCCCAGGTGGAAATGGACGCCATCCTGGTC CTCGAATAAGCGCCTCTCGCCACGGGCCGTCCAGCCCGTGGCATCGTTCCGGAAGGACTCCGTCATGCGTCACACCCTCCCCTTGCTGCTCTGCGCGGCC
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| Amino Acid Sequence |
>(p)ppGpp synthetase
MPSIDALAERLSTYLGADQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSGQFGETVAELVDGV SKLTQMNFESKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHSMRVEFEDLGFKAMHPMRSERIRT AVRRARGNRKEIVNKIEESLTNCLRREGMEGEVIGREKHLYSIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKA NGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSAEDDQPKGTHARARQWVKGILELQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIME LPKGSTAVDFAYAVHTDVGNTCIACRINRRLAPLSEPLQSGETVEIVTAPGARPNPAWLNFVVTGKARTHIRHALKQQRRSESINLGERLLNKALAGFES HLDKISPERIQAVLGEYRLDVIEDLLEDVGLGNRMAYVVARRLLASDGEQLPSPEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLESCK NIGEIRHNPEKCIQLSWAKDVAGEFNVELRVELEHQRGLIALLASSVNAADGNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALKGVIRITRV RA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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