Pseudomonas parafulva NBRC 16636 = DSM 17004, H619_RS0122295
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00012.12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCTGAAAAGCCGCACGTTCCTCGCCGAGCTGATGCCGCATTACCCGATCTACGTGCCGCTGTTGCCTGACCAGGCGCAAGAGGCCATGGGCCAGGTGCA CCCAAGGGCACAGATCACGTTCGACATCCTCATGCGCGAAGGCTTCGAAACCGAGCACTACATCGACATCTTCGATGGCGGCCCCACCCTGCATGCGCGC ACTTCTGGCATCCGTTCCATCGCCCAGAGCCGCGTGGTGCCGGTGAAAGTCGAGCAGGCTGCCGGCAAGGGCGGGCGCCCGTACCTGGTGTGCAATGGCC AGTTGCAGGACTACCGCGCCGTGCTGCTGGACTTGGACTGGGTGCCTGGCAAGCCAGTGAGCCTGAGCCAGGAAGCGGCAGATGCATTAGGGGTGGGCGA GGGTGCCAGCGTGCGCCTGGTTGCCGCTTGAGGCCTGAGGGCGACGTTGCAGGTTTAGACGTGTTTCGCGCCGGCCGATGCCGACGCACAAGGAGATAGC
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| DNA Sequence for Gene |
>H619_RS0122295
ATGATCGTTCGTCCTGTACGCAGCAGCGACTTGCCTGCGTTGATCGAGCTGGCGCGCAGCACCGGCACCACCGGCCTGACTACCCTGCCGGCCAACGAAG AGCGCCTTGGGCATCGCGTGGGCTGGGCGGAAAAGACCTTCCGTGGCGAAGCCGAGCGTGCCGATACCGATTACCTGTTCGTGCTGGAAAACGACGAGGG CCTGGTGGTGGGCATCAGTGCCATCGCCGGCGCCGTGGGCCTGCGCGAGCCCTGGTACAACTACCGGGTCGGGTTGACGGTGAGCGCCTCCCAGGAACTG AAGATCTACCGCGAGATCCCCACGCTGTTCCTGGCCAACGACCTGACCGGCAACTCCGAACTGTGCTCGTTGTTCCTGCGCCATGACCACCGCTGCGGCC TGAATGGCCGCCTGCTGTCGCGGGCCCGCATGCTGTTCATCGCCGAGTTTCCCGAGCTGTTCGGCAAGAAGATCATTGCCGAAATGCGCGGCATGTCCGA CGCCCAGGGCCGCTCGCCGTTCTGGGAGTGCCTGGGCCGGCACTTCTTCAAGATGGAATTCAGCCAGGCCGACTACCTGACGGGCGTGGGCAACAAGTCG TTCATCGCTGAGCTGATGCCCAAGTTCCCGCTGTATACCTGCTTCCTGTCCGAGGCGGCGCGCAGCGTGATCGGCCGGGTACACGCCGATACCGAGCCGG CCTTGGCGATGCTCAAGCAGGAAGGCTTCAACTACCAGGGCTACGTAGACATCTTCGACGCCGGGCCGGCCATCGAGTGCGACACCGACAGGATCCGTGC GGTGCGCGACAGCCAGACCCTGGTACTGGCAATTGGTACCCCAGGCGACGACGCCACCCCTTACATCATTCACAACCGCAAGCGTGACGACTGCCGCATC ACGGCTGCACCCGCGCGCCTGGCTGCCGGTACGCTGGTGGTCGACCCGCTGACCGCCAAGCGCCTGCGCATGGGGGCCGGGGACAACGTACGCGCCGTGC CGCTTTCGGCAGGCCGGGAGGGCCAGCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTACCCACTACATTGCAGGTCATTGGCACGCCGGCCACGGCGAAGCGTTGCAATCGCTCAACCCGGTGACCCAGGCTGTGGTCTGGCAAGGGCAGGGCGC CGATGTGGGCCAGGTGGAGGCTGCGGTACAAGCGGCCCGGCAGGCCTTTCCGGCCTGGGCTCAGCTTAGCCTGGAGGCGCGCATCAGCGTGCTCGAACAG TTCGCTGCGCAGCTCAAGCTGCATACCGATGCGCTGGCCTACTGCATTGGTGAAGAAACCGGCAAACCGTTATGGGAATCGGCCACCGAAGTCACCAGCA TGATCAACAAGGTGGCTATCTCGGTACAGAGCTACCGGGAGCGCACCGGTGAGAAAAGCGGGCCGCTGGCCGACGCCACCGCTGTGCTGCGGCACAAACC CCACGGGGTGGTCGCGGTGTTTGGGCCTTACAACTTCCCCGGTCACCTGCCCAACGGCCACATCGTGCCAGCCCTGCTGGCCGGCAACTGCGTGGTGTTC
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| Amino Acid Sequence |
>arginine N-succinyltransferase
MIVRPVRSSDLPALIELARSTGTTGLTTLPANEERLGHRVGWAEKTFRGEAERADTDYLFVLENDEGLVVGISAIAGAVGLREPWYNYRVGLTVSASQEL KIYREIPTLFLANDLTGNSELCSLFLRHDHRCGLNGRLLSRARMLFIAEFPELFGKKIIAEMRGMSDAQGRSPFWECLGRHFFKMEFSQADYLTGVGNKS FIAELMPKFPLYTCFLSEAARSVIGRVHADTEPALAMLKQEGFNYQGYVDIFDAGPAIECDTDRIRAVRDSQTLVLAIGTPGDDATPYIIHNRKRDDCRI TAAPARLAAGTLVVDPLTAKRLRMGAGDNVRAVPLSAGREGQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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