Pseudomonas parafulva NBRC 16636 = DSM 17004, H619_RS0121085

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00011.11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCCGGGCGCCCAGGGCGGCCCGCTGATGCACGTGATCGCCGGCAAGGCGGTGTGCTTCAAGGAAGCGCTGGAGCCTGAGTTCAAGAGCTACCAGAAGCA AGTCATCGAAAACGCCCAGGCCATGGCCCAGGTGTTCGTCGACCGTGGCTACGACGTGGTGTCTGGCGGTACCGACAACCACCTGTTCCTGGTCAGCCTG ATTCGCCAGGGCCTCACCGGCAAAGACGCCGACGCTGCCCTGGGCCGCGCGCACATCACCGTCAACAAGAACGCCGTGCCCAATGACCCGCAGTCGCCGT TCGTGACCTCGGGCCTGCGTATCGGCACCCCGGCCGTGACTACCCGTGGCTTCAAGGTGGCCCAGTGCGTGGCCCTGGCCGGCTGGATCTGCGACATTCT CGACAACCTCGGTGACGCTGATGTGGAAGCCGATGTGGCGAAAAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTTTACCGCTGAGTGGAGTCCCACACC
DNA Sequence for Gene
>H619_RS0121085
ATGCAACGTTACTCGGGCTTCGGCCTTCTCAAGCACTCCCTCAGCCACCACGAGAACTGGCAGCGCATGTGGCGCACGCCCACGCCGAAAAAGGTGTACG ACGTGGTCATCGTTGGCGGTGGCGGCCATGGCCTGGCCACGGCCTACTACCTGGCCAAGGAGCACGGCATCACCAACGTGGCGGTAATCGAAAAAGGTTA CCTGGGCGGCGGCAACACCGCCCGTAACACCACCATCGTGCGTTCCAACTACCTGTGGGACGAGTCGGCGCACCTGTACGAACACGCCATGAAGCTGTGG GAGGGCCTGTCCCAGGACCTCAACTACAACGTCATGTTCTCCCAGCGCGGCGTGTACAACCTGTGCCACACCCTGCAGGACATGCGTGACTCCGAGCGCC GCGTCAGTGCCAACCGCCTGAACGGCGTGGACGGCGAGCTGCTGAACACCGCCCAGGTGGCGGCCGAGATCCCGTACCTGGACTGCTCCAAGAACACCCG CTACCCGATTTTGGGTGCCACCGTGCAGCGCCGTGGCGGCGTGGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCAGCAGACGCCCTGGGCGTG GACCTGATCCAGCAGACCGAAGTGACAGGTTTCCGCAAGGAAAACGGCGCGGTCATTGGCGTTGAAACCAACAAAGGTTTCATCGGCGCCAAGCGCGTCG GTGTGGTCACCGCCGGTAACTCCGGGCACATGGCCAAGCTGGCCGGCTTCCGCCTGCCGCTGGAATCGCACCCGCTGCAAGCCCTGGTATCCGAGCCGAT CAAGCCGATCATCGACAGCGTGATCATGTCCAACGCCGTACACGGCTACATCAGCCAGTCCGACAAGGGCGACCTGGTGATCGGTGCCGGTATCGACAGC TGGGTCGGCTACGGCCAGCGCGGCTCGTACCCGGTGATCGAGCACACCCTGCAGGCCATCGTCGAGATGTTCCCCAACCTGTCCCGCGTGCGCATGAACC GCCAGTGGGGCGGCATCGTCGACACCTCGCCGGACGCCTGCCCGATCATCACCAAAACACCGGTCAAGAACATGTTCTTCAACTGCGGTTGGGGTACTGG CGGCTTCAAGGCGACCCCGGGTTCGGGCAACGTCTTCGCTGCGAGCCTGGCCAAGGGCGAAATGCACCCACTGGCTGCGCCGTTCTCCATGGACCGTTTC TACAACGGCGCACTGATCGACGAACACGGCGCTGCCGCCGTCGCCCACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGGAGACACCGTCATGTTGCATATTTTCTGTCCCCACTGCGGCGAGCTGCGCTCCGAAGAAGAGTTCCACGCCTCTGGCCAGGCGCACATCGCCCGCCC GCTGGACCCCAGCGCCTGCTCCGACGAGGAGTGGGGCACGTACATGTTCTACCGTGACAACCCGCGCGGTATCCACCACGAGCTGTGGGACCACGTTGCC GGCTGCCGTCAGTACTTCAACGTCACCCGCAACACCGAGACCTACGAGATTCTGGAAACCTACAAGATTGGCGAGAAGCCGCAGGTCAGCGCCCGTGAAC ACACGCCTGAGCGCTCGGCTGCTGTAAACGAACGGGGAGTCAACGTATGAGCCAGACCTATCGCCTCGCCAGCGGCGGCCGCATCGACCGCAGCAAGGTG TTGAACTTCACCTTCAATGGCAAGACCTACCAGGGCTATGCCGGCGACAGCCTGGCGGCCGCACTGCTGGCCAACGGCGTTGACATCGTCGGCCGCAGCT
Amino Acid Sequence
>sarcosine oxidase subunit beta
MQRYSGFGLLKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVIEKGYLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLW EGLSQDLNYNVMFSQRGVYNLCHTLQDMRDSERRVSANRLNGVDGELLNTAQVAAEIPYLDCSKNTRYPILGATVQRRGGVARHDAVAWGFARAADALGV DLIQQTEVTGFRKENGAVIGVETNKGFIGAKRVGVVTAGNSGHMAKLAGFRLPLESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDS WVGYGQRGSYPVIEHTLQAIVEMFPNLSRVRMNRQWGGIVDTSPDACPIITKTPVKNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSMDRF YNGALIDEHGAAAVAH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site