Strain | Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00011.11, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCTGGTGCGTGGGCCGCAACAAGCCGTTCTCGTGGATCGGCCTGCGTGGCATGAACCGTGAAGACTGCGTGCGCGAGAACCGCAAGCAGCTGGTAGGCC TGAAGCCGATCGACCCCACCAAGTGGCTGCCTGAAGGCGCGCAACTGGTGTTCGACCCCAAGCAAGCCATTCCGATGGACATGGTCGGCCACGTGACCTC CAGCTATGCCGCCAACTCCCTGGGCTATTCGTTTGCCATGGGCGTGGTCAAGGGCGGCCTCAAGCGCATGGGCGAGCGGGTTTACTCGCCGCAGGCTGAC GGCAGCGTGATCGAGGCGGAAATCGTGTCTTCGGTGTTCTTCGATCCGAAGGGTGAGCGGCAGAACGTCTAAGTCCCCGGATGGCAAACGGTGCCGGGCG GGTAATGAGGTCCCTGTAGGAGTGGGTAAACCCGCTCCTACAGGATGCACCACTCGCCATGGCACCGTATGCGACCTACAGAATTCAAGGCAGGTAAGAA
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DNA Sequence for Gene |
>H619_RS0121070
ATGAGCGCTATCAACGTCTTCCAGCAAAACCCCGGCGCCGAGGCCAAGGCCCAGTCGCCGCTGCACCATGCCGACCTGGCCAGCCTGGTGGGCAAGGGCC GCAACAACGCAGGCGTGATCCTGCGTGAACGCAAGTTCCTCGGCCACCTCACCCTGCGCGGTGACGGCCATAACCCGGAATTCGCCGCTGGCGTGCACAA GGCCCTGGGCCTCGAGCTGCCGGTCGCGCTGACCGTGGTCGCCAGCAACGACATGTCGCTGCAGTGGGTGGGGCCGGATGAGTGGCTGCTGATCGTACCC GGCGGCCAGGAGCTGGCGGTGGAGCAAAAGCTGCGTGCTGCCCTTGAAGGCCAGCACATCCAGGTGGTCAACGTCAGCGGTGGGCAGAGCCTGCTGGAGC TGCGCGGCCCGAACGTGCGCGAAGTGCTGATGAAGTCCACCAGCTACGACGTACACCCGAACAACTTCCCGGTCGGCAAGGCTGTGGGCACCGTGTTCGC CAAGTCGCAACTGGTGATCCGCCGTACGGCCGAAGACACCTGGGAACTGGTGATCCGCCGCAGCTTCTCGGACTACTGGTGGTTGTGGCTGCAGGACGCA TCGGCTGAGTACGGTCTGGCCATCGAGGCCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGAAACACCATGAGTCGGGCACCGGATACCTGGATTCTTACCGCCGACTGCCCGAGCATGCTCGGTACCGTCGACGTGGTGACGCGTTATCTCTTCGA GCAACGCTGCTACGTCACGGAGCACCACTCCTTCGACGACCGGTTGTCAGGGCGGTTCTTCATCCGCGTGGAGTTTCGCGTACCGGACGGTTTTGACGAA CACGGCCTGCGTGCAGGCCTGGCCGAACGCAGCCAGGCTTTTGGCATGGCCTTCGAGCTGACCGCGCCCAACCACCGCCCCAAGGTGGTGATCATGGTGT CCAAGGCCGACCACTGCCTGAATGACCTGCTGTATCGTCAGCGCATTGGCCAGCTGGCCATGGACGTGGTGGCGGTGGTGTCCAACCACCCCGACCTGGA GCCATTGGCCCACTGGCACAAGATCCCTTACTACCACTTTGCCCTCGACCCCAAGGACAAGCCCGGGCAAGAGCGCAAGGTGCTGCAGGTGATCGAGGAC
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Amino Acid Sequence |
>sarcosine oxidase subunit gamma
MSAINVFQQNPGAEAKAQSPLHHADLASLVGKGRNNAGVILRERKFLGHLTLRGDGHNPEFAAGVHKALGLELPVALTVVASNDMSLQWVGPDEWLLIVP GGQELAVEQKLRAALEGQHIQVVNVSGGQSLLELRGPNVREVLMKSTSYDVHPNNFPVGKAVGTVFAKSQLVIRRTAEDTWELVIRRSFSDYWWLWLQDA SAEYGLAIEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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