Strain | Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00005.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCGAGCGCCTGAGTCACTACGCGACTCACAGTGGGCGCATCTTGCTCTTGCGCTGACCACTGTCGACTCATCGTGTGCGCCGGCGTGCCCGCAGCCTGG TCAAAACATGCCAAGCGCTCGATGTCAGACACGATTCGTGGACAGTCCCGCGGCTCGACTGCCAAGGCGGGCGCCCAGCAAAACAGTAATAAAAGCCAAA CGCCATTTGGATAGCGAGGAATCATTCCATCTCAACTCTGTTATTCAACAGCACACCGGTACTGGCAACCAGCCGGCCACTCCACAACAGCGAAACAAGG CTAGTACACGAAGACGGATACTTACAAGAAATTATTTTGTTACATATTCAAACTCGACGCTAGGCAAATATTAAGCGCATGGTTTTTTAGCAACACGACG CTCAAGCATCGGATGCTTCAGCCATTCATGTTTAATATTAAACGCCAACTTGTAGGACGCATCCTACATATAGGCCTCGCACCAGCAAGGATATATAGCC
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DNA Sequence for Gene |
>H619_RS0118485
ATGCGCAAATCATCCGGTTCTGTCGCACCCAAAGAACGCATCAACATCAAGTATGTACCCGCCACTGGCGATGAACACGCCGAAATAGAGCTGCCGCACA AGATGTTGGTGCTGGGTGATTTCGGTCTGGATGACACCCGCGCTTTGGAAGACCGCTCAGTCATGCGCATCGATAAACACACCTTCAACAACGTGTTGAA CGATGCCGCTGTCAGCCTGGCCATGTCCGTGCCCTCCGAGCTCAGCACAGCCCCGGATGCGGAGCTGGCGGTCGCCCTGCAGTTCACGTCCATCGACGAC TTTGGACCCGATAGCATCGCCCGCCAGGTTCCGGAGCTGAATAAGTTGCTGAAGCTACGCGAAGCGTTGGTGGCCCTCAAAGGCCCGCTGGGCAACGTGC CGGCGTTTCGCAAGCAACTGCAGCACCTGCTGAGCAACGAGCAAGCGCGCAAACAACTCGCCGAAGAACTGGACCTGGTGCTTGAGGCGCCTAAACAAGA CTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACAACGGAGCGTCCCCATGCCAAAGCAAAACAGCACGACCCTCACGGCTGAAACAACAACCGAGACATTGAGCAACGCCACCTTGCTCGACCAGATCAT GGCAGAAACCAGATTGGTGCCCTCTCAAGAGGGCTATCAAGTCGCTCGCCAGGGTGTATCGGCCTTTATTGCCGACATCCTGAAAACTCATGACCCTGAT CAATTAATCAATAAGCACCGCGTTGATCAGATGATTGCAGAGCTGGATCGGGTACTCGGCAAACAGATGGACGCCATCCTGCACCAGCCCGCGTTCCAGC AGCTCGAGTCGGCTTGGCGCAGCCTCAAACTTCTGGTCGACCGCACAGACTTTCGCGAGAACATCAAACTTGAGGTTTTGCATGTCAGCAAGGACGACTT GCTCGACGACTTCGAGCATGCGGCCGACATTACCTGCAGTGGCATTTATAAACATGTCTACACCGCAGGGTATGGCCAATTTGGTGGTGAACCGGTTGCC
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Amino Acid Sequence |
>hypothetical protein
MRKSSGSVAPKERINIKYVPATGDEHAEIELPHKMLVLGDFGLDDTRALEDRSVMRIDKHTFNNVLNDAAVSLAMSVPSELSTAPDAELAVALQFTSIDD FGPDSIARQVPELNKLLKLREALVALKGPLGNVPAFRKQLQHLLSNEQARKQLAEELDLVLEAPKQD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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