Pseudomonas parafulva NBRC 16636 = DSM 17004, H619_RS0116845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGAAAATGCCTGGCCGGCGCTAAAACCGTTGCTATGACGCTTTAAACGGGGCCGGCTTTCGGCTAATGTTGCGCCCCCCGTTTCGAGTGCCCCCGATG CCGCGCCCCGCCTGGTCCCTGTATGCCTATCAACTGATCGAGCCCGACGAGCAGCTTGACCTGTTCGCCTGCCAGGAGGTGCGTGTCCACCTGGTCGCCC GCCAGCTCGAGTTGGGCGTGCCGGTCGACAGGACATTGTGCGGGGGGTTGCTGCCGGCTCACCCTCGCTGGTCCGGGGTGCCGCAGTCGATCTACCGCGA TGGCCGCCTGTGTGACCTGTGCCGTGCCATACTCGATGCACAACGGCGTGGCATGCGGCCCATCTGGCCCGAACTGCAGGCCAGTTGAAGCCGGGCCCTT TCATCATCTGCAAAGGCTTGCAACGCGCCAATGCCTCCCGCTGGCCCGGGGGCGGGTGTACAATCGAACCTCTTGACTCACCTTTCGAAGGATTTACCGG
|
|
| DNA Sequence for Gene |
>H619_RS0116845
ATGTTGCCGCGCTTTCCTGCCGTCACCCGTAGCCTGTCCCTGGCCGCCCTGCTGGTAGCGGGCCCCGCCGCCGCGCTGGAGCTGCCGCTGCCACCGCCCG GTGATGACCTGGTCGGTCAGGTGCACGTCATCAAGGCAAAGTATGAGGACACCTTCGCCGACATCGGCACCGCCAACGACCTGGGCTACCTTGAAATGAT CGCGGCCAACCCCGGTGTCGATCCCTGGCTGCCTGGCGCCGGTACGGAAATCATCCTGCCCACGCGCTACATCCTGCCGCCGGGCCCGCGTGAAGGCATC GTCATCAACCTGGCGGAGTACCGGTTGTACTACTACCCCAAGGGGCAGAATGTGGTGCACACCTTCCCGCTGGGTATCGGTCGCGAGGGGTGGGGGTCGC CGGTCGCCAACACCAAGATCACTGCCAAAACGCCGAACCCCACCTGGACCCCGCCTGCTTCCATTCGTGCCGAGCATGCTGCGGACGGTGACATCCTGCC GGCCGTCGTCCCTGCAGGGCCCGACAACCCGTTGGGGCCCTTCAAGTTCACGCTGGGTGTGCCTGGCTACCTGATCCACGGCTCCAACAAAAAGTTCGGT ATCGGCATGCGCACCAGTCACGGTTGCTTCCGCATGCTCAACAACAATGTGCTGGAGCTCTCGGGTATGGTGCCGGTGGGCACGCCAGTACGCATCATCA ACGAGCCCTACAAGTTCGGGGTCAGTCAGGGCAAGGTATACCTGGAGGCCCACACGCCGCTGGATGACCAAGGCAACCCGTCGGTCGTGGACAAGCATAC GGCTGTTATCAACGCCCTGCTCAAGCGCGAAGACCTGGCCAACAACGTGCGCATGAACTGGGACATGGTGCGTGACGTGGTGGCTGCCGAGGATGGCATG CCGGTCGAAATTGCCGTGCCGGCCAATGGCCCTGGCGATGCGCCGATGGTATCCACTATTCCGGCTGAGCTGCAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCTCGCCTACTGTGTGACAGGGCCTGCCATTGCGCAGGCCTTTTTGTATGAGCTCGACCGCTTTATTGCGGGCAATAAAAAAGCCGACCCACAGGTGGAT CGGCTCGATAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGTGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTC TGAGCGGCTGCCAGTGCGTCGTCAGCCTTACGGTAGGCTTCATCGGCACGAGCTTGAGCACGAGCTGCTGCGTCTTCAGTCGCAGTCAGACGAGCTTCGG TTTCTTTGGAGACGCTGCTGCAACCGGTAGCCAGAACTGCGGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTCAAGGACTT TCTATTAAATAGCCATCTCTCAGAAAAGAGAAACTGGCCGGCGTACATAGTACCCATTACTTGTAGTAAGTAAACTGACAGAGCGCAAGAACTGCAAAAA
|
|
| Amino Acid Sequence |
>hypothetical protein
MLPRFPAVTRSLSLAALLVAGPAAALELPLPPPGDDLVGQVHVIKAKYEDTFADIGTANDLGYLEMIAANPGVDPWLPGAGTEIILPTRYILPPGPREGI VINLAEYRLYYYPKGQNVVHTFPLGIGREGWGSPVANTKITAKTPNPTWTPPASIRAEHAADGDILPAVVPAGPDNPLGPFKFTLGVPGYLIHGSNKKFG IGMRTSHGCFRMLNNNVLELSGMVPVGTPVRIINEPYKFGVSQGKVYLEAHTPLDDQGNPSVVDKHTAVINALLKREDLANNVRMNWDMVRDVVAAEDGM PVEIAVPANGPGDAPMVSTIPAELQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|