Pseudomonas parafulva NBRC 16636 = DSM 17004, H619_RS0111035 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00018.18_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGTATTGCAGGCGCTGTTGTCAGAGCAGGTGCCGGTGCGGGACATTCGCAGCATTGCCGAGTCCATCGCCAACAATGCGGCCAAGAGTCAAGATACCG CCGCGCTGGTAGCGGCAGTGCGCGTCGGATTGTGTCGCGCCATCGTGCAAAGCATTGTAGGCGTTGAGTCCGAGCTGCCTGTGATCACCCTTGAGCCCAG GTTGGAACAGATTTTGCTCAATAGTCTGCAACGGGCCGGGCAAGGTCAGGAAGACGGTGTTCTTCTGGAGCCGAGCATGGCCGAAAAGCTGCAGCGTTCG CTGATCGAAGCCGCCCAGCGTCAGGAGATGCAGGGCCAACCGGCCATCCTCCTGGTCGCCGGCCCGATCCGCGCCATGCTCTCGCGTTTTGGCCGGCTGG CTGTACCGAACCTGCACGTGCTGGCGTATCAGGAAATTCCTGACAACAAGCAAGTCACCATCGTTGCCACCGTGGGCCCTAACGGCTGAGGTAGTGGATA
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| DNA Sequence for Gene |
>H619_RS0111035
|flhF
ATGCAAGTTAAGCGATTTTTCGCTGCTGATATGCGTCAGGCCATGAAGCTGGTTCGCGATGAGCTGGGCGCTGATGCGGCCATCATCGGTAACCGCCGCA TTGCCGGCGGTGTCGAGCTGACGGCGGCGCTCGACTACAAATTGTCCGCCCTGGCACCGCGGGTGCCCAATGCCGAGCTTGAAGAAGAACTGCGCAAGAC CCACTCGCGCATTGCCACGGTTCAGGCCGAGCTCGACCAGCGTCAGGACAACAGCGAGAGCAACCGCCAATTGTTTGCCGGGCAATCGTTGACCGCTGCC GAACCGCTGGTTGAACCCCATGTGGATGCCCCTCAGCCGGCCGCTGCCCCTGCGCAGGCGTCGGTAGACCCGCGCCTGTTCGAGGCCATGCGCTCCGAGC TTTCGGGCCTGCGCCAGTTGCTTGAAGTGCAACTGGGCTCACTGGCGTGGACCCAGCTGCAAGGCAGCAAGCCGCAACAGGCTACGCTGTGGCGCCGGCT GCAGCGCCTGGGCCTGTCCGGGCCGATCGCCCGTGAGCTGCTGGCGCTGACCGGCGAGATTGAGGAGCCGCGCCATGCCTGGCGCATGCTGCTGGCGCAC CTGGCACGCATGATCGATATCCCGGAGGTGGAGCCGATCGAGGCGGGCGGTGTGATTGCCGTGGTCGGCCCGGCCGGCATGGGCAAGACCACCACCCTGG CCAAGCTGGCCGCGCGCTATGTGCTCAAGTACGGCGCGAACAACCTGGCGCTGGTGAGCATGGACAGTTTTCGCATCGGTGCCCAGGAGCAGCTCAAGAC CCTGGGCCGCATCCTCAACGTGCCTGTCACCTACGTCGACCCCGGTCAGTCCCTGGCGGCGGCGCTGGAGCCGCTGCTGCGCAAGCGCGTGGTGCTCATC GACACTGCTGGCCTGCAGGCCAGCGACCCGGCCCTGCGCATGCAGCTCGAAACCCTGGCAGGGCGGGGCATCGCCGCGAAGAATTACCTGGTGCTGGCCA CCACCAGCCAGAAGCAGGTGCTCACCGCCGCCTACCACAGCTACAGCCGCTGTGGCCTGGCCGGTTGCATTTTGACCAAACTTGATGAATCGGCAAGCCT CGGCGATGTGCTGAGCCTTGCCATCAGCTACCGGCTGCCGGTGGCCTATCTGACCGATGGGCCGCGCATTCCGGACGATCTTCACCTGCCACGCGGGCAC CAGTTGGTCACCCGGGCGGTCAGTGTGCAACAGCAGGATGAGCCCAGCGAAGAGGCCATGGCCGACATGTTCGCTGATCTCTACCACAACCCTCGGCGAG TGGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACATGAAGTGTGTGCAAGGTAGCTATGCCAAGGGGCACGCAGAATTGCCCTTCGTGTGGCCTGAGTCCCAGCGAGACAAGGTAAAGAACAGACATGGGTA GCATGCATCCCGTACAGGTGATCGCCGTGACCGGCGGCAAAGGTGGCGTCGGCAAGACCAACGTTTCAGTGAACCTGTCCCTGGCACTGGCCGAACTGGG CCGCAGGGTTATGCTGCTGGACGCCGACCTGGGCCTGGCCAATGTCGACGTCCTGCTGGGCCTCACCCCCAAACGCACCCTCGCAGACGTGATCGAGGGG CGCTGCGAGCTGCGCGATGTGATGCTGCAGGGCCCTGGCGGGGTGCGTATCGTGCCGGCCGCCTCGGGCACCCAGAGCATGGTGCACCTGGCGCCCGCCC AGCACGCGGGGCTTATCCAGGCGTTCAGCGAGATCGGTGACAACCTTGACGTGCTGGTGATCGACACCGCTGCCGGTATTGGTGACTCGGTGGTCAGCTT
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGADAAIIGNRRIAGGVELTAALDYKLSALAPRVPNAELEEELRKTHSRIATVQAELDQRQDNSESNRQLFAGQSLTAA EPLVEPHVDAPQPAAAPAQASVDPRLFEAMRSELSGLRQLLEVQLGSLAWTQLQGSKPQQATLWRRLQRLGLSGPIARELLALTGEIEEPRHAWRMLLAH LARMIDIPEVEPIEAGGVIAVVGPAGMGKTTTLAKLAARYVLKYGANNLALVSMDSFRIGAQEQLKTLGRILNVPVTYVDPGQSLAAALEPLLRKRVVLI DTAGLQASDPALRMQLETLAGRGIAAKNYLVLATTSQKQVLTAAYHSYSRCGLAGCILTKLDESASLGDVLSLAISYRLPVAYLTDGPRIPDDLHLPRGH QLVTRAVSVQQQDEPSEEAMADMFADLYHNPRRVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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