Pseudomonas parafulva NBRC 16636 = DSM 17004, H619_RS0103880
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTCAGCGGCGCCCTGTTCTGGGCGCTGGCCAGCTTGGGCGGCCACCTGTACAGCAAGGGCACCGAGCTGCCAGAACTGACCCTGCGCGATGCCAGTGAT CAGCCGGTGGCGCTGCACAGCTACCGTGGCAAGCCGCTGGTCATCAATATCTGGGCCACCTGGTGCCCGCCGTGCCGCCGCGAAATGCCGGTGCTGCAGC AGGCCCAGGGTGAGTACCCGCAGGTGACCTTTCTGTTCGTCAACCAGGGCGAGACCCCGGAAAACGTCAGCACCTTTCTCGCAACCACGGGCTTGAGCCT GACCCACGTGCTGTTCGACGGCACCGGCCTGCTGGCCCAGCGCGTGGGCTCCATGGCGCTGCCCACCACCCTTTTCTATGACGCGGATGGCCGGCTGGTG GGCAGCCACCTGGGCGAACTGTCCCGGGCCAGCCTGCGTCATGCCCTTGAATCATTCGACCGGGCCCCTGCGCCCGGGCCTGCCGTACAAGGAAAATGAC
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| DNA Sequence for Gene |
>H619_RS0103880
ATGCGCATCACCCCACTGCTGCCCCTGACCCTGGCCCTGCTTGCCACCCCTGCCGTGTATGCCGAAGACCTGCCCAAAGCCGTTCAGCAGTTGCAGGCCA AGGGCGCTGTCATCAAAGGCAGCTTCGACGCCCCCAACGGCATGCGCGGCTATGCGGCCGAGTACCAGAACAACGGCCTGGCCTTGTATTTGACCCCGGA CGGCAAGCATGTGCTGGTGGGTAACCTGTTCGACGAACAAGGCAAGGACCTCACCGCCGAGCCCCTGCAGAAACTGGTGTACGGGCCAATGACCAAGGCA TTCTGGGGCAAGATGGAACAGTCTGCCTGGATCGCCGATGGCAAGGCCGACGCGCCGCGCACGGTCTACCTGTTCAGCGACCCGAACTGCCCGTACTGCA ACATGTTCTGGGAGCAGGCGCGCCCGTGGGTAGAGGCTGGCAAGGTCCAGTTGCGCCACATCATGGTGGGCATCATCCGCGAAGACAGCCCCGGCAAATC GGCGGCCCTGCTCGCCGCCAAAGACCCTGCCAAGGCCCTGCAGCAGCATGAAAAAGCCGGCCGCGCGAGCACTCTCAAGGCCCTTGAGCAGGTGCCGGCT GCCGTGCAGCAGAAGTTGGCGGGGAACATGGCCTTGATGCAGGAGATGGGCCTGCAGGCCACACCGGCGATTTTCTACAAGGATGACCAAGGCAACATCC AGAGCCAGCAGGGTGCACCGCGGCCTGAGATGCTGGAGAAGATCTTGGGCAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATTGGTGGAGGGCGCTGGGTGCTCGCCACAGCAAGGTCTGCGCCTGTGAGACCGAGCGCCGCCCGCGCGGCGCATCGCGAGCTTTGCTCGCTCCTACGCT TATTTCGGGCCAATTAGGCCTGCGCCATTTGCGCGCGGACGCCTTGGCGCATGACGCGATGTCGCGTGGAACAAACCAGGCGGTCGCGCGCGCCCGCCAC AGGCATGACTGGCCCGAAATAAGCGTAGGAGCGAGCGCAGCTCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCATAGGCGCTGCACCTGTAACGGCGAA CACCTTCACGCCCTACCACAGCCTGGGGGGCATAAGCCGAGATACCAGGAAGGGCGCTGGGTGCTCGCCACAACAAGGTCTGCGCCTGTAAGACCGAGCG CCGCCCGCGCGGCGCATCGCGAGCTGCGCTCGCTTTTACGTTTTTTTCGGGCCAATTAGGGCTGCGCCATTTGCGCGCGGACACCTTGGCGTACGACACG
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| Amino Acid Sequence |
>dihydroneopterin aldolase
MRITPLLPLTLALLATPAVYAEDLPKAVQQLQAKGAVIKGSFDAPNGMRGYAAEYQNNGLALYLTPDGKHVLVGNLFDEQGKDLTAEPLQKLVYGPMTKA FWGKMEQSAWIADGKADAPRTVYLFSDPNCPYCNMFWEQARPWVEAGKVQLRHIMVGIIREDSPGKSAALLAAKDPAKALQQHEKAGRASTLKALEQVPA AVQQKLAGNMALMQEMGLQATPAIFYKDDQGNIQSQQGAPRPEMLEKILGKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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