Pseudomonas parafulva NBRC 16636 = DSM 17004, H619_RS0102690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGCCCAAATTCCAGGCCCCTGAGTTGGGCTGGGTGAAGCAGACCCTGCGCTCCACCGGTGATGTGAAACAGTCCAACCTGATCCGTCAGCCGGATGGC AGCGTTGCCTTCCTGGTCGACTTTGCCGGCCCTGCGCTGGCTGCTCTGCCGGAAGACACCCCGGTGCGCAGCCAGATCAGCGTGGGCGACAACGCCGAAG TTGTGGAAAACAACCTGCGCTACAACCCTGAAACCAAGGGCTGGCGCCTGACGTTGCGGCTCAAGGTGAAGGATGCCAATAAAGCGACCGAGATGCGTGC CGCACTGGTGCGTGATGTGCCGGTAGAAGCTGCCGCACCTGCCCAGGAAACCAAGCAGGACAAGGCTGCTGCCAAGCATGCCAAGGCCGGCAAGGCGACC AAGGCCGAACAACCTGCCGCCGAGGCGGCGCCCACCACCGGGGCCCCGGCCACCACCGAGAAGGTGCTGACCGAGACCTGGAGCTACCAGTTGCCTGCCG
|
|
| DNA Sequence for Gene |
>H619_RS0102690
ATGAGTAACTCAAACGCAAGGCCGGTATCGCTTGGCGAGTACCTGGCCCACCTCCCCCTGAGTGACGAGCAGCGAGCAGAGCTTGCCAGCTGCACGTCAT TCAGCGAGCTGCACCAACGCCTGGCTGCCACCCCCCACGCCAGCCCTGCCGAGGCCGTGCAGGCCTCGGTGGGCTCGCGCCTGACCGTGGGCAATGCGGC CGAGCTTGAAGACGCCGAGATGCTCAGTGTCGATGGCAGTGGCCGCCTGCGCCTGAAGATCGCCCCGCCGATCAACCGCACCAAGGTGGTGCCAGAGCCC TGGCGCACCAACGTGCTGGTGCGCCTGTGGCGGCGCATGACAGGGCGCCCCAATGCGCCGCAGCCACCCAAGCGCGAGCTGCCGGCAGCGCGTTGGCGCA CGGTGGGCTCCATCCGCCGGTACATCCTGCTCACCCTCATGATCGGCCAGACCCTTGTCGCCGGCTGGTACATGAAGAGCATCCTGCCGTACCAGGGCTG GTCGTTCGTCGACCTGGACGAAGTCACCCGCCAGCCCCTGTGGGACACCGTGGTGCAGGTGTGGCCGTATGCGTTGCAGACGTCCATCCTGATCCTGTTC GGCATCCTGTTCTGCTGGGTGTCCGCAGGTTTCTGGACGGCGCTCATGGGCTTCCTCGAGCTGCTGACCGGGCGCGACAAGTACAAGATTTCCGGCAGCA GTGCCGGTAACGAGCCGATCGCTGCCGACGCGCGTACTGCGCTGGTGATGCCGATTTGCAACGAAGACGTACCCCGGGTGTTCGCCGGCTTGCGCGCCAC CTTCGAGTCGGTGGCGGCCAGCGGCAACCTCGACCGTTTCGACTTCTTCGTGCTCAGCGATACCAACGACACCGACATCGCCGTGGCCGAGCAACAGGCC TGGCTGGATGTGTGCCGTGAAACCAAAGGCTTCGGCCGTATCTTCTACCGCCGCCGTCGGCGCCGGGTGAAGCGCAAGAGCGGCAACCTCGACGACTTCT GCCGTCGGTGGGGCGCCGACTACAAGTACATGGTCGTGCTCGACGCCGACAGCGTGATGAGCGGCGAATGCCTGAGCAGCCTGGTGCGCCTGATGGAGGC CAACCCGGATGCCGGTATCATCCAGACCGGGCCCAAGGCCTCTGGCATGGACACCCTGTACGCGCGCATGCAGCAGTTCGCTACCCGTGTATACGGCCCA CTGTTCACCGCCGGCCTGCACTTCTGGCAGCTGGGTGAGTCGCACTACTGGGGGCATAACGCGATCATTCGCATGAAGCCCTTCATCGAGCACTGCGCCC TGGCGCCGTTGCCCGGCAAGGGTGCGTTCGCCGGTGCGATCCTGTCCCACGACTTCGTCGAGGCAGCGCTGATGCGCCGTGCCGGTTGGGGGGTATGGAT CGCCTACGACCTGCCAGGCAGTTATGAAGAGCTGCCGCCCAACCTGCTGGACGAGCTCAAGCGCGACCGCCGCTGGTGCCACGGCAACCTGATGAACTTC CGCCTGTTCCTGGTGAAGGGCATGCACCCGGTGCACCGTGCGGTGTTCCTCACCGGGGTGATGTCGTACCTGTCGGCACCGTTGTGGTTCCTGTTCCTGG TGCTGTCCACCGCGTTGCTGGCCACCAACACGCTGATGGAGCCGCAGTACTTCATCGAGCCCTACCAGCTGTACCCGTTGTGGCCCCAGTGGCACCCGGA AAAAGCCGTTGCGCTGTTCTCCACCACCATCGTGTTGCTGTTCTTGCCCAAGCTGCTCAGCGTGATCCTGATCTGGGCCAAGGGCGCCACCGAGTTCGGG GGGCGCATCAAGGTCACCCTGTCGATGCTGATGGAGATGCTGTTCTCCATGCTGCTGGCACCGGTGCGCATGATCTTCCACACCCGGTTCGTGCTGGCCG CGTTCCTGGGCTGGGCGGCGACCTGGAACTCGCCGCAGCGCGATGACGACTCCACCCCGTGGAGCGAAGCGCTACGCCGTCATGGCCCGCAAACCCTGCT GGGCTTTGCCTGGGCTGGGCTGGTGGCGTGGCTGAACCCGAGCTTCCTGTGGTGGCTGGCGCCAATCGTCGGTTCGCTGGTGCTGTCGATCCCTGTGTCG GTGATTTCCAGCCGCACGCGCCTGGGCCTGGCGGCCAAGGATGAGAAGCTGTTCCTCATCCCGGAAGAATACGCCACGCCGCAGGAGCTGCTGGCCACCG ACCAGTACACCCACGAGAACCGCTGGCATGCCCTGCATGACGGCTTCGTGCGGGCAGTGGTCGACCCACGCCAGAATGCCCTGGCCTGCGCCATGGCCAC CGCGCGCCACGGTCAGGCAGCGCCCATCGAAGCATTGCGCGTTGAGCGGGTGGCCAAGGCGATGGAGGTTGGCCCGAAGGGGCTGGACCTCAACACCCGC CTGGCGTTGCTCAGCGACCCGGTGGCGTTGACCCGCCTGCACGAGCAGGTATGGGCCGAACACAATGCGGCCTGGATCGATGCATGGCGTGCGTCGATCA AGAACGACCCGCATTCGCCGCTGCTGCCGCTGCACCCGGAGAACGAAGGCCAACCGGCACTCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CAGGCTTCTTCGCGGGTAAACCCGCTCCTACAGGGTTATCCACACATCCTGTAGGCGCGGGTTTACCCGCGAAGCTTTTCAGGGCCCAGGCTGATTTTGG CCAACAAAGTCCCCGCCAGCTCTAGGTCCCCAGCCCACCATGCGTTAGCATCCCTCTCCGACAGTACGCAGCGGCCAGTACGGCCGTGCCAATAAAAAAG ATTCGCTACTTTTATTTCCAGGGGACTTGGTGATGTTCAAGAAATACCTTTCGCGACTGCTGGTGGGTGTTACCGCCCTGGTCGCCGTAACGGCCGTACA GGCAGGCGCCATCGACGAAGCGGTCAAGCGCGGTACCTTGCGGGTGGGCATGGACCCAACCTACATGCCGTTCCAGATGACCAACAAGCGCGGCGAGATC ATCGGCTTCGAGGTGGACATCCTCAAGGCCATGGCCAAGTCGATGGGCGTGAAGTTCGAGGCGGTTTCCACGGCCTACGACGGCATCATCCCAGCCCTGC
|
|
| Amino Acid Sequence |
>glucosyltransferase MdoH
MSNSNARPVSLGEYLAHLPLSDEQRAELASCTSFSELHQRLAATPHASPAEAVQASVGSRLTVGNAAELEDAEMLSVDGSGRLRLKIAPPINRTKVVPEP WRTNVLVRLWRRMTGRPNAPQPPKRELPAARWRTVGSIRRYILLTLMIGQTLVAGWYMKSILPYQGWSFVDLDEVTRQPLWDTVVQVWPYALQTSILILF GILFCWVSAGFWTALMGFLELLTGRDKYKISGSSAGNEPIAADARTALVMPICNEDVPRVFAGLRATFESVAASGNLDRFDFFVLSDTNDTDIAVAEQQA WLDVCRETKGFGRIFYRRRRRRVKRKSGNLDDFCRRWGADYKYMVVLDADSVMSGECLSSLVRLMEANPDAGIIQTGPKASGMDTLYARMQQFATRVYGP LFTAGLHFWQLGESHYWGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNF RLFLVKGMHPVHRAVFLTGVMSYLSAPLWFLFLVLSTALLATNTLMEPQYFIEPYQLYPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGATEFG GRIKVTLSMLMEMLFSMLLAPVRMIFHTRFVLAAFLGWAATWNSPQRDDDSTPWSEALRRHGPQTLLGFAWAGLVAWLNPSFLWWLAPIVGSLVLSIPVS VISSRTRLGLAAKDEKLFLIPEEYATPQELLATDQYTHENRWHALHDGFVRAVVDPRQNALACAMATARHGQAAPIEALRVERVAKAMEVGPKGLDLNTR LALLSDPVALTRLHEQVWAEHNAAWIDAWRASIKNDPHSPLLPLHPENEGQPALA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|