Pseudomonas parafulva NBRC 16636 = DSM 17004, H619_RS0102540
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCCAGCACGGTGCCCAGCAGATCATGGCGCAGGCCTACCTGCCGCAGATCGTCGATGGCGACAAGCGCATCCTGATGATCGATGGCGAGCCGGTGCCTT ATTGCCTGGCACGCATCCCGGCCAGTGGCGAAACCCGGGGGAACCTGGCTGCGGGCGGGCGTGGCGAGGCGCGCCCGCTGACCGAGCGCGACCGCTGGAT CGCGGCCCAGGTGGGCCCGGTGCTGCGTGAAAAGGGCCTGCTGTTCGTGGGCCTGGACGTGATTGGCGACTCGCTCACCGAAATCAACGTCACCAGCCCT ACCTGCATTCGCGAAATCGACGCGGCCTACAACACCGACATCGGCGGCCAGCTGATGGACGCCATTGATCGCCAGCTCAAGGCCCGCTGACCGCGGGCAC GAAGTACAAGCGCCGAGTGCGGTATGATGCGCAGCCGCTCGCCGGGAGCCACTCACCTGCACAGGCGTGGCTCAAGCTTGACGCTGACCGTGGATAACCG
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| DNA Sequence for Gene |
>H619_RS0102540
ATGACGCTGCCCGCTGACATCCCTGCCGACCTGCTGCCGCCGCGCGTACGCCCGGTGGACCGCCTGGGCTTTACCCTGTTCCTGGCTGCGCTCGTGCACC TGGCGTTGATCCTTGGCGTGGGTTTCAGCGTGGTCAAGCCCGCCCAGGTCAGCCACACCATGGATATCACCCTGGCCACCTTCAAAAGCGAAAAGCCGCC GCAAAAGGCGGATTTCCAGGCCCAGGACAACCAGCAGGGCAGCGGTACGCTGGACAAGAAAGCGGTGCCCAAGACCACCGAACTTGCACCTTTCCAGGAC AGCAAGATCAACAAGATCACCCCGCCCCCGGCCGCCAGGCCGGACGTGGCGCCACCGCCCAAGCCGCAAAAATCTGCGGTGGCCACCAAGGCCGCCAAGC CGCAGAAGGTCGAGCCCAAGCCCAAGGAAAGCAAACCCCAGCCCAAGGCAGCGCCGGCTCCAGCGTTCGACAGTTCGCAGTTGTCCAGCCAGATCGCCAG CCTGGAGGCGGAGCTTGCCAACGAACAGCAGCTGTATGCCAAACGCCCGCGCATTCACCGGCTCAATGCTGCCTCCACCATGCGCGACAAGGGCGCCTGG TACAAGGAGGAGTGGCGCAAGAAGGTGGAACGGGTGGGCAACCTCAACTACCCCGACGAAGCGCGTCGGCAGCAGATCTACGGCAACCTGCGCATGATGG TTTCGATCAACCGCGACGGCTCGCTGTACGAGGTGCTGGTGCTTGAATCGTCCGGGCAGCCCGTGCTTGATCAGGCAGCGCAGCGCATCGTGCGCCTGGC GGCACCGTTTGCGCCGTTTACCGGGGACCTGGCTGAATACGACCGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGGCTTTCCAGCAAC TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCCTGAACCAGGCGCAGATTATCTAGCAGTTTTGCCAGTTGTGACTGCAGCGAAAGCGACGTGCAATTGCGGTACATCCAACCGCGAGGAATTACACGC CATGAACAGCCCATCACCCCAAGCGCAATTCGAAGAGCAATTCCAAAAAAAAGCGCACAGCTTATGGGAAGATTTATCAAAAGCCGAAGGCCACTCCCTC AGCGCCGATATACTCACGACGACCGTAAACACACAGGTTCACGTGAAGCGAGGCGATGAAATAATCCAGTACACGTCTGTCAAAGGCGCATTTCATGCGT TAGCAGCCGATAGAACGGCACTGCTTACCTGTGTCTACGATGACCATTTGCCTGTCAACAAAGAAGGTGATTTCCCAGCATTGCAAATACTTTTCCGTAA CCTTCGATCAGGGCGTGCTGACGTCACCACTTCGCCCAACGCAGACATCATGGTAGCGCTCGGCTGGGGCCAGTGGTTTCGAGAGAAGTACGGCTTCGCG
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| Amino Acid Sequence |
>energy transducer TonB
MTLPADIPADLLPPRVRPVDRLGFTLFLAALVHLALILGVGFSVVKPAQVSHTMDITLATFKSEKPPQKADFQAQDNQQGSGTLDKKAVPKTTELAPFQD SKINKITPPPAARPDVAPPPKPQKSAVATKAAKPQKVEPKPKESKPQPKAAPAPAFDSSQLSSQIASLEAELANEQQLYAKRPRIHRLNAASTMRDKGAW YKEEWRKKVERVGNLNYPDEARRQQIYGNLRMMVSINRDGSLYEVLVLESSGQPVLDQAAQRIVRLAAPFAPFTGDLAEYDRLEIIRTWRFARGDRLSSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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