Pseudomonas parafulva NBRC 16636 = DSM 17004, H619_RS0100375

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCAAGCTGGCCGTGTTCGACGTGGACGGCGTACTCACCGACGGGCGCCTGTATTTCCTCGAAGACGGGAGTGAGTTCAAGAGCTTCAATACACTGGATG GCCAGGGCATAAAAATGCTCATGGCCTCTGGCGTGACCACCGCCATCATCAGCGGGCGCAAGACGCCGGTCGTCGAGCGGCGGGCGAAGAACCTCGGCAT CCCGCATCTGTTTCAGGGGCGCGAAGACAAACTGGTCGTACTTGACGGCCTGCTCGCCGAGCTGGGCCTGAGCTATGATCAAGTGGCCTACCTGGGCGAT GACCTGCCCGACTTGCCGGTTATCCGCCGGGTGGCACTGGGCATGGCGGTAGCCAGCGCGGCACCGTTCGTGCGCCAGCACGCCCATGGGGTCACGCAGG CACGGGGTGGCGAGGGTGCCGCCCGCGAATTCTGCGAACTCATCATGCAGGCCCAGGGCACCCTGGACGCTGCCAACGCCAACTATCTGTAAGGTTGCCC
DNA Sequence for Gene
>H619_RS0100375
ATGTTCAGCAAGAAAGCCAGAAACATCGTGCTGCTCGGGGCCATCGCCGCCCTGCTGGTAGCCGTCGGCTACTGGAACGTTAGCCCCGAGAGCTTCCTGG AGCAGCCCGCGGCGCAGGTGGACGAAAGCGCCATCGACTACTACGCCATCAATGCCCACAGCGTGCAGTTCTTGCCAGACGGCAAGCTGCAATACGAAAT GACCGCCGACAAGGTCGAACACCTGAAGGCCAGCGAAGTCACACTGCTGACCACCCCGGACCTGCACATGTATCGCGGTACGGAGTACCCATGGCATGTG CAGAGCGTGCGCGCCGAGGTCAACCCTGACGGCAGCGAGGTCGAACTGATCGACAACGTGCGGATCGCCCGCACGGACGAAAAGAAGCGTGAAACCATCA TTACCAGCTCGCGCATGACCGTGTTCCCGCAGAAGGAATATGCGCAGACCGAGCAAGCCGTTAGAATCGACGGCGCCGGTGGCACGACTACGGGCAAAGG TATGAAAGCGTATTTGAAAGAAGGCAGGATGGACCTGCTCTCTAACGTAAGAGGACAGTATGAGGCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCTCCCCCTTTTGCTCAGCCTGAGCGCAGCACTGGGAAGCGCGAGCGCCCTCGCCCTGCCAAACGACCGTGATCAGCCCATTCGCATCCAGGCCGAC AACGCTCACCTGGACGACAAGAAAGGCGTGGCCACCTATACCGGCGACGTCATCATCACCCAGGGTTCGATGATGATCAAAGGCAATACCGTGACCATCA CCCGTACCGCTTCCGGCGATATCGACGTGGTGACCTCGGTGGGCAACCTGGCCTACTTCGAGCAGCAGCAGAGCGCCGCCAAAGCCGACAAGATGAAAGG CTGGGGCGTGACCATCCAGTATCAGTCGCAAAAGGACCTGGTAGTGCTCACCGACCGCGCCAAGGTCGAAAACGAAGGCAACACCACCGAAGGCGAGAAG ATCGTCTACAACACCCAGACCCAGGTTGCCACCGCAGGTCGTGGCGGCAATGTGACCACACCGCGTCAGCGCATCGACATGGTGATCCAGCCCAAGAAGA
Amino Acid Sequence
>lipopolysaccharide ABC transporter permease
MFSKKARNIVLLGAIAALLVAVGYWNVSPESFLEQPAAQVDESAIDYYAINAHSVQFLPDGKLQYEMTADKVEHLKASEVTLLTTPDLHMYRGTEYPWHV QSVRAEVNPDGSEVELIDNVRIARTDEKKRETIITSSRMTVFPQKEYAQTEQAVRIDGAGGTTTGKGMKAYLKEGRMDLLSNVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site