Pseudomonas sp. 35MFCvi1.1, F571_RS0115530
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 35MFCvi1.1 F571DRAFT_scaffold00006.6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGATGCCGACGCGATTCTCCTGCTGCAATGGGTAGGCCTGCATCTACCCGAGCATTACCGGCGCCTGGAACACATGCTCCGCGCCTGGGGCGGCAACGCC TCGGGCAGTGGCATAGCCAACATCGACAACACAGGCGAAGTGCACCCCGACACCTATTGGTGGCAGCACTCGGTGGGCAATGTCCGGCACACGCCGTTTC GCACGCTGTGGCTGGACCGCCCGGACGCCTTGTTGCAGCAACTGCGCGCGCATCCTCGCGCCGTGGGTGGCCGTTGTGGCCAATGCCGCTGGCTCAGCAT CTGCAACGGCAATACCCGCACCCGCGCCTGGGCCGAGGGTGATCTCTGGGGCCAGGACCCCGGTTGCCACCTCAGCGATGAAGAAATCGGCGTGTCGCCC TTACCGACCATCCCTTGCGTCATGCACTGAAGCACCCGCCTGGCGAGCCATCTGACAAAGGATGGGGCCGGCCCACCTGATGAAGTACCAAGGACGTCCC
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| DNA Sequence for Gene |
>F571_RS0115530
ATGCATCCATCGATTATTTTACCGGCTGCACTTGAGTCCCCGTTCAGACCGGGCGAAGTTGCCCTGGTCGGCGCTGGCCCCGGCGATCCACGCTTGCTGA CCCTGCGCGCCTGGAGCCTGTTGATGCAAGCCGACGCCGTGGTTTACGACCGCCTGATCAGCCCCGAGCTGCTGGCATTGATCCCCCTCACCTGCGCCCG GCATTACGTCGGCAAGGCCAGCGGCTGCCACAGCCTGCCTCAGGATCAGATCAACGAACTACTCGCCGACCTCGCCGATCTGGGGCAGCGTGTGGTCCGG CTCAAAGGTGGCGACCCGTTCATCTTCGGCCGTGGCGCCGAGGAACTGGAGTACCTGCTGCAACGCAACATTGACTGCCAGGTCGTCCCCGGCATTACTG CCGCCTCCGGGTGTAGCGCTTACGCTGGCATTCCACTGACCCATCGGGAGCTGGTCAACTCCTGTCGATTCATCACCGGGCACCTGCAACATGATGGTGA GTTGCAATTACCCTGGAGCAGCCTCGTCGACAGCAGCCAGACCCTGGTGTTTTACATGGGGTTATCCAATCTCGGGATTATCGCCCAGCGCTTGATCGAA GCTGGAATGCCCGCCGAGACACCGGCGGCGCTGATCAGCAATGGCACGCGTCCCGACCAGCATGTTGCACGAGGCAGGCTGCACCAATTGCCGACCCTGG CGCGGGAATGCCCACCTGGCATTCCGACGCTTGCGGTGATCGGCAAAGTGGTCGATCTGTTCGCTGCCCAACAACAGGAATTCCCGGCGCGCTTTTACCC CGCAGCGCTGCAACGCCAGCGCAAGGTGGCGATATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGCATGGTGCTTGGCCCATTGTTATGGATCGGTGCGGCTCACGCCGGTGCAGCGACTCCGCCCTCCGACGTGGCCGCCAACCTCTACCAACAGCATTG CCAGAGCTGCCATGGCGCCAATCGTCTCGGCGGTACGGGACCGGCCTTGCTGCCGGAAAGCCTGAGCCGGATCAAACCCGACGAAATCCGCAGCGTGATC CAGGACGGTCGTCCCGCGAGTCAGATGAGCGGGTATGCCAACGTGTTCAACGCCACGCAGATCGACGCGTTGGTGGACTACCTCCAGCAACCACCCGCCA CCCCACCCACCTGGAGCAACGATGACATTCGCGGCAGTCATTCGATTCTCGCCGATATCAACAAACTGCCCGACACACCCCAGCATCGCGCCGATCCCCT GAACCTGTTTGTGGTGGTGGAAGCCGGTGATCATCATATCGACATCCTCGACGGCGACCGCTTTGAAGTGCTGGCTCGGTTCGCTTCGCACTTTGCAGTG
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| Amino Acid Sequence |
>uroporphyrin-III C-methyltransferase
MHPSIILPAALESPFRPGEVALVGAGPGDPRLLTLRAWSLLMQADAVVYDRLISPELLALIPLTCARHYVGKASGCHSLPQDQINELLADLADLGQRVVR LKGGDPFIFGRGAEELEYLLQRNIDCQVVPGITAASGCSAYAGIPLTHRELVNSCRFITGHLQHDGELQLPWSSLVDSSQTLVFYMGLSNLGIIAQRLIE AGMPAETPAALISNGTRPDQHVARGRLHQLPTLARECPPGIPTLAVIGKVVDLFAAQQQEFPARFYPAALQRQRKVAI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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