Pseudomonas sp. 35MFCvi1.1, F571_RS0112210

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 35MFCvi1.1 F571DRAFT_scaffold00004.4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATCAAACTGGCGGTATTCGACGTCGACGGCGTGCTGACCGACGGGCGCCTGTACTTCCTCGAAGACGGCAGCGAATTCAAGACCTTCAACACCCTCGAC GGCCAAGGCATCAAGATGCTGATGGCAGCGGGCGTGCAGACCGCTATCATCAGCGGACGCAAGACCCCGGTGGTCGAACGACGGGCCAAGAACCTCGGCA TTCCACACCTGTACCAGGGTCGCGAAGACAAACTGGTGGTGCTCGACGAGCTCCTTGCCCAACTCAACCTGAACTATGAACAAGTGGCCTACCTCGGCGA CGACCTGCCGGACCTGCCGGTGATTCGCCGCGTCGGCCTGGGCATGGCCGTGGCCAACGCCGCCGGTTTCGTGCGCGAACACGCCCACGGCATTACCCAG GCCCGTGGCGGCGAGGGTGCCGCGCGCGAGTTCTGCGAATTGATCCTGCGCGCCCAGGGCCGCCTCGATGCGGCCAACGCCGCGTACCTGTGAGCCCATC
DNA Sequence for Gene
>F571_RS0112210
ATGCTGAGCAAAAAGATTCGCAACATCCTGATATTCGGTTGCATCGCGGCGCTATTCGCTGCGGTCGGCTACTGGAACATCAGCCCGGAACGCTTCCTCG ACAAGCCAGTGGCGCATGTCGATGAAGCCATGATCGACTATTACGCCACCAATGCCCACAGCGTGCAGTACCTGCCGGACGGCAAATTGCAGTACGAAAT GACGTCCGACAAGGTCGAACACCTGAAAGCGACCGAAGTGACGTTGCTGTCCAATCCTGACCTGAACATGTTTCGCGGCACCGAATTCCCCTGGCACGTC CAGAGCGATCGCGGCGAAGTCAACCCGGACGGCACCCAGGTCGAGTTGATCGACTCGGTACGTATCACGCGTTTCGACGAAAAAAACCGTAAAACCCTGA TTACCACCACCCGTATGACAGTGTTCCCGCAGCAGCAATATGCGCAGACCGATCAACCCGTTAGAATCGACGGCGCCGGCGGTGTATCGACAGGCAACGG AATGAAAGCGTACTTGAAAGAAAGCAGGATACACCTGCTATCGAACGTAAGAGGACAGTATGAGGCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCTCCCTATTTTGCTCAGTCTGAGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGACCGATCAAGCGCAGCCTATCCGCATTCAGGCCGAC GACGCCCAACTGGACGATAAGAATGGTGTTGCCACCTATAAAGGTGATGTGATCATCACTCAGGGCTCGATGAAGGTCACCGGCAACACCGTGACCATCA CTCGCACCCCGACTGGCGACATCGACGTGGTGACCTCGGTGGGCAACCTGGCGTACTTCGAGCAATTGCAAACAGCTGGCGACACCAAGCCTGTTCAGGG CTGGGGCGTGACCATCCAATATCACGCCGCGCAAAACCGCGTCGTACTGATCGACAAGGCCAAAGTTGTCGACAAGGACAACAACGTCACCCAGGGCGAA AAAATCGTCTATGACACGGTGAAAAAACTCGCCAGCGCCGGTCGCGCCACGGGCAGCAAGGTCACCGAGACACGTCCGCGTATCGACATGGTGATCCAGC
Amino Acid Sequence
>lipopolysaccharide ABC transporter permease LptC
MLSKKIRNILIFGCIAALFAAVGYWNISPERFLDKPVAHVDEAMIDYYATNAHSVQYLPDGKLQYEMTSDKVEHLKATEVTLLSNPDLNMFRGTEFPWHV QSDRGEVNPDGTQVELIDSVRITRFDEKNRKTLITTTRMTVFPQQQYAQTDQPVRIDGAGGVSTGNGMKAYLKESRIHLLSNVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site