Pseudomonas sp. 35MFCvi1.1, F571_RS0104985
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 35MFCvi1.1 F571DRAFT_scaffold00002.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCAACGGCTCGGTGATGTTGATCCGGTCGTCGATGTTCTGGTCCAGCAGCAACTGAATCAGTTCGCGCTTGAGCGTCATGGTCTGCTCGGGGCCGGGT GCCCAGACGAATTCGCTGGCGGGGATGATGCCGTCGTCGGCCACGTCCATGCCGAAAGCGTCTTCACCGAAGCGCACGATGTACTGGCCGGTTTTGCGAT TGAGGCCGACGAAGCCTTTGAGTTGGTCGGCGGCCTGGCAAATGAGCTGGGAAGTGATGCGCATGGTAAACCTCACAAAAGGTCGCTAAGGACCGGTGAT CGATGGTTTACACGCAGGGCAAGTGAACGGGTTTCCCTCTGCCGGGGAAACTGCAGGTGTGAAGATTACTGCAAAGAGCCGCACAAAAGCGTCGAAGAAA TCTTCTTTAAACACGTTTATGTCGGTCTGGTGATAGCACAAGCGGCGCTCAGTTGTTAAAAGATACGTCTTTGAAAACTCATCGCAAAAGGACTTCGACC
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| DNA Sequence for Gene |
>F571_RS0104985
ATGCCTGTCTCCTTCACCAAAAGCGCCCTGCTGCTGAGCCTGATGCTCGGCCTCGGCCAGGCACAGGCCACCAGCGAGCCAAGCCCCAGCGCACTGGCAA CCCGCCTGGGCATTCCGCACCCGGCGGTGATCGCCCACCGTGGCGCCTCTTTTGATGCACCGGAATCCACCGCCGCAGCCTACAAACTGGCTCGCGACCT GGGTGCCGACTACCTGGAAATGGACCTGCAACGCAGCAAGGATGGTGTGCTGTTCGCCCTGCACGACAACAACCTGCAACGCACCACCGACGTCGCTACC AAATTCCCTGAGCGCAAGGACAGCCCGGCCAACGAATTCACCATCGCCGAACTGAAAACCCTGGATGCCGGCAGCTGGTTCAACACGGCGTACCCGGATC GCGCGCGTCCTGGCTACGTGGGTCTGAAGATCCTGACCCTGGACGAAATCATCGACATCGCCCAAGGCAATCCACTGCACAAGCCTGGCCTGTACATCGA AACCAAGGAGCCAAAGCAGTTTCCCGGCATCGAACGCGATCTCAAGGATAAATTGCAGGACCGTGGTTGGCTGAGCCCGACGGGTTCCAAACTGGCAAAA AGTAATCTGGCGGTCGGCCAGGGGAAAGGCAAAGTCGTGCTGCAAACCTTCGAGAAGAGCAGCCTCGAACTCCTCGAGAAGGAGATGCCGCAAGTGCCGA AAATCCTGCTGTTGTGGGTCGGCGAAGGCAGCATCGAGCCGAAATCCAAAGTGACGTTCGCTGAGTCCGGAGACAAGGACAAGGCGACTTACTACGCCAA ACAGGAACCGAAAGACAAAGCCGAATTCCAGCAATGGGTCGAGTACGCCAAGGCCCAGGGCGCTATCGGCACCGGGCCTTCTGCCGCGCTGACCAAGGGC GGCGATCAGAGCTATTCAGACCTGGTGAAACCGTGGATGAACCAGTTCACCCACGATCAGGGCATGCTGGTGCACGTCTACACCATCGACGATGCCGTGG ATTATCAGAAAGTGATGGATGCCGGTGTCGATGGCATCTTCACCAATCGCGCCAGCGAACTGCTGAAGTTCTATAAGCGCCCGGCGGCGGCGAGTGTTGC GCAGTTGTTGCAGAACAACGGGTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGGCGCCAGGCGCTGCACCGCGTCGTCCCCATCGCGGGCAAGCCACGCTCCCACAAGGTCTGCGCAAAACCTGTGAGAGCGTGGTTGCCCGCGATTGTT TTTTTAAGGGTGAATTAAGTTGCGCTGTTTAACCTGATCCCACTTAAACAGCTCCTCCAAGGAAAGAACTTGATGAAAACCTTAACTGCCCTGTTCACCG CTGCTGCCCTGACCCTCACCGCAGGCCTGGCCCAAGCTGATGTTCGCGTCGACCAGATCCCCGAGTTGGTCAAAAGCGGCAAGATCAAACCCCTGGAAGA AATGAACCAGGCCGCGCTGAAGTTGCATCCGGGCGCCACGATTACCGATACCGACCTGGATAACCACTTCAACGGTTACGAATATGAAGTGGAACTGCGT CTGGCTGACAACACCGAATGGGACGTGGACTTCGATGCTGCCACTGGCAAGGTCCTGAGCAACAAACGAGACAAGTGATTCAACGGCAAAAAGCCGCACG
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| Amino Acid Sequence |
>glycerophosphoryl diester phosphodiesterase
MPVSFTKSALLLSLMLGLGQAQATSEPSPSALATRLGIPHPAVIAHRGASFDAPESTAAAYKLARDLGADYLEMDLQRSKDGVLFALHDNNLQRTTDVAT KFPERKDSPANEFTIAELKTLDAGSWFNTAYPDRARPGYVGLKILTLDEIIDIAQGNPLHKPGLYIETKEPKQFPGIERDLKDKLQDRGWLSPTGSKLAK SNLAVGQGKGKVVLQTFEKSSLELLEKEMPQVPKILLLWVGEGSIEPKSKVTFAESGDKDKATYYAKQEPKDKAEFQQWVEYAKAQGAIGTGPSAALTKG GDQSYSDLVKPWMNQFTHDQGMLVHVYTIDDAVDYQKVMDAGVDGIFTNRASELLKFYKRPAAASVAQLLQNNGY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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