Pseudomonas sp. 35MFCvi1.1, F571_RS0102140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 35MFCvi1.1 F571DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCCTGAGCCCGGTCACTGCCGGTTACTACACCGCTGCTTGCGTGTTCGGTGGCAGCCTGATGCGTCCGCTGGGCGGCGCGCTGGCGGATCGCTTCGGC GGGATTCGCACCCTGTTGGCGATGTACACCGTGGCAGCGATCTGCATTGCGACCGTGGGTTTCAATCTGCCGAGTTCCTACGCAGCGTTGGCCCTTTTCG TCTGCACTATGCTCGGTTTAGGTGCAGGTAACGGTGCCGTATTCCAGTTGGTCCCACAGCGTTTTCGTCGGGAGATCGGTGTGATGACCGGTTTGATCGG CATGGCCGGTGGCATCGGTGGCTTCGCACTGGCGGCCGGCATGGGCGCAATCAAGCAAAGTACCGGCAGCTATCAAATGGCGTTGTGGTTGTTCGCCAGC CTCGGCGTACTCGCCTGGTTCGGTCTGCACGGGGTGAAACGTCGCTGGAGAACCACTTGGGGTTCGGCAGCCGTCACCGCTGCTCGGGTGTGAGGATTGA
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| DNA Sequence for Gene |
>F571_RS0102140
ATGAGCCTGCAACTGAGTTTTGCCGAAGCCAGCGCCATCGGCCCTCGCGAAGAGAACCAGGACGCTCTGCGCCTGGTTACTCCGGCCCCGGCACTGGCGG CGAGCAAGGGTTACCTGTTCGCCATCGCCGACGGCGTCAGCCAATGCGCCGATGGCGGGCTCGCGGCCCGTTCGACCTTGCAGGCCCTGGCGCTGGACTA CTACGCCACCCCGGAAACCTGGGGTGTCGCCCAGGCACTCGATCGCCTGCTACTGGCGCAAAACCGCTGGTTGCAGGCCAACGGCGGCGGGCAACCGCTG CTGACCACGGTCAGTGCCCTGGTGATGCGCGGCAGACGTTTCACCCTGGCGCATGTCGGCGATTGCCGGGTGTACCGCTGGCACGCCGACACCTTGCAAC GGGTGAGCGAAGATCACGTCTGGGACCAGCCGGGCATGCAGCATGTGCTCAAGCGGGCCCTGGGGCTGGATCAACATCTGGTGCTGGATTTTCTGGATGG CGAATTGCGCCTGAACGAGAGTTTCGTGCTGCTCAGCGACGGCATCTGGGCCGTGCTGGGCGACACCGCCATCGCGGCGATTCTGCGCGATCAGCCTGAC CTCAACAGTGCCGCGCAGACCCTGGTCAGCGCCGCGCACCTGGCCGGCAGCCAGGACAATGCCAGCGCCCTGCTGGTGCGGGTCGATGCCCTTGGCGAAA CCAGCATCGGCGATGCACTGATTCATCTGCAGCAATGGCCACTCCCGCCTGCACTGAAACCGGGCCAGACCTTCGAAGGCTGGCAGGTCGAAGGGATTCT CGGCCAGAGCCAGCAATCGCTGCTCTACCGGGTGCGCGATGCACAACAACAGCGCTGGTTGCTGAAAACCTTGCCCGGTGCTCTACGTGACGATCACCAG GCCGGGCAGGCATTGTTGTCGGAGGAATGGTTTCTCAAGCGTGTAGCCGGTCGACACTTCCCTGAAGTCCATGCCGCCAGTCAGCGTCAGCATTTGTACT ACGTGATGCGTGAATACTCCGGGTCGACCCTGGCTGAGTTGCATGAACGCGTCACATCGCTGCCCCTGGCGCAATGGCAGGACTTGGCCGAACGCTTGTT GCGGGCTGTCGGCATCCTGCATCGACGGCAGATCCTGCATCGCGATATCAAACCGGAAAACCTGCTGCTGGGGGACGACGGCGAGTTGCGTCTGCTGGAT TTCGGCCTCGCCTACTGTCCGGGGCTGTCCGAAGATCAAGCCTTCGCCCTGCCCGGAACGCCCAGCTATATCGCGCCGGAAGCCTTTCGCGGCGACCCGC CGACACCACAACAGGATTTGTATGCAGTCGGCGTGACCTTGTATTACCTGCTCACCGGGCATTATCCCTACGGCGAAATCGAAGCATTCCAGCGTCCACG GTTTGGTGTGCCGGTCAGCGCCAGTCGCTACCGACCCGACCTGCCGGAATGGATCGCGCAGAGTCTGGAGCGCGCGGTGGCGGTAGCCCCGGATCAGCGC TTTGAAACGGCAGAAGAATGGTTGCTGGTGTTGGAACAAGGGGAACGACGCAGTTTGAGCGTGCGCCCCAGACCGTTGCTGGAGCGCGAACCGTTGAAGG TCTGGCGGACGTTGGCACTGGTGTCGTTGCTGGTGAATCTGGTGCTGCTGTTTTTGTTGTTTCATGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACCAATCCTTGTAGCAGCTGGCGAAGCCTGCGTTCGGCTGCGAAGCAGTCGTAAATCCTGCATGCACGATGTACCTGTCACACCGCAGTGCCTGAAATC GCGACTACTTCGCGGCCGAACGCAGGCTTCGCCAGCTGCTACAGAGACCGCGCCAATTGCGGGCAACATGCATTGTTTCGGTGCACAAACATCCCAATCA AATACCGAGACCGCGACCAACCCCAGCAAATTCTGGCGTCTGAAGAACTTGGCACAACCACTGCATTACCTTTCCCAACAGACATAAAGCCCGGCCTTCA ACGTAGAAGGCTGCGCTGCCCGAGAGAACGGGACAAGGACAAAGGCGTCCTCGCTAGTTAGCTAGCGGGACGCCTTTTTTTGTTTGCGCAAAATTTTGTC GAGCAAGGCCTGAATGCCCTGATGAGGCAGGCCCGAGCTCCCCGGAGAACCTGATGAAAAAACTAAAACTGGTGATGATCGGCAACGGCATGGCCGGGGT
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| Amino Acid Sequence |
>protein kinase
MSLQLSFAEASAIGPREENQDALRLVTPAPALAASKGYLFAIADGVSQCADGGLAARSTLQALALDYYATPETWGVAQALDRLLLAQNRWLQANGGGQPL LTTVSALVMRGRRFTLAHVGDCRVYRWHADTLQRVSEDHVWDQPGMQHVLKRALGLDQHLVLDFLDGELRLNESFVLLSDGIWAVLGDTAIAAILRDQPD LNSAAQTLVSAAHLAGSQDNASALLVRVDALGETSIGDALIHLQQWPLPPALKPGQTFEGWQVEGILGQSQQSLLYRVRDAQQQRWLLKTLPGALRDDHQ AGQALLSEEWFLKRVAGRHFPEVHAASQRQHLYYVMREYSGSTLAELHERVTSLPLAQWQDLAERLLRAVGILHRRQILHRDIKPENLLLGDDGELRLLD FGLAYCPGLSEDQAFALPGTPSYIAPEAFRGDPPTPQQDLYAVGVTLYYLLTGHYPYGEIEAFQRPRFGVPVSASRYRPDLPEWIAQSLERAVAVAPDQR FETAEEWLLVLEQGERRSLSVRPRPLLEREPLKVWRTLALVSLLVNLVLLFLLFHG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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