Pseudomonas sp. CF150, CF150_23349
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CF150 soap_scaffs_150.Contig75, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTTCCCCGCCAACGCCTGCACACTATCGGCCGCGGCGGCGTCGCCTGCAATTGGCCACGTGCCTGGCGCGCCGGCACGGCGGTAGACCTGCATATCCCT TCCCTAGGGCCCAGCGCCCGTTATCCAGGCTATGTCGCCTGGTGCCGCAAAGTCGAACAGGGCTATCGCATTGGTATTTGCTTTACCGACGAACACGCCT TGTTCGGTGCACGGATGGGCGAGCAAGTGTGCCAGATCGAGCGTTACTGCCGCCTGCACGAAGACGCCGAGCCAACGCCTGCACAACTTGAAACCATGGC CCGTGAGTGGGTGTCGCGTCATGCCGGCGAGTTCTCCCATGAGGCGGTTGTGCAGCCAGCGCTGGATTAAACCGGGCTTTGCCCATTGTCGCGGGCCCGT GTTACGCGCTAAGGTTCCTCCCCCCTGCATTCAAATCATGCTGTGCCCGCCGCACGGGGATAGCTGGCGGCCGGCACCCGTGACCCTGGCGAGTAACACG
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| DNA Sequence for Gene |
>CF150_23349
ATGGCTGATTTACCGATCAATGACCTTAACGTTGAATCCAACGAGACCCTGATCACCCCCGATCAGCTCAAGCGCGAAATCCCCCTGAGCGACGCTGCCC TGCAGACCGTCACCAAGGGCCGCGAAGTCATCCGTGACATTCTCGACGGCACCGACCACCGTCTCTTCGTGGTGATCGGGCCCTGCTCTATCCACGACCT CAAGGCCGCCCACGAATATGCCGAGCGCCTCAAAGTGCTGGCGGCTGAAGTGTCCGACACCTTGTACCTGGTCATGCGCGTGTATTTCGAGAAACCGCGT ACCACCGTCGGCTGGAAAGGCTTGATCAACGACCCGTACCTGGACGACTCCTTCAAGATCCAGGATGGCTTGCACATCGGTCGCAAACTGCTGCTGGACC TGGCTGAAATGGGCCTGCCCACCGCCACCGAAGCCCTCGACCCGATCTCCCCGCAATACCTGCAGGACCTGATCAGCTGGTCGGCTATCGGCGCACGCAC CACCGAATCCCAGACCCACCGCGAAATGGCGTCCGGCCTGTCGTCGGCCGTAGGCTTCAAGAACGGCACTGACGGCGGCCTGACCGTGGCGATCAATGCG CTGCAATCGGTCTCCAGCCCTCATCGCTTCCTGGGTATCAACCAGGAAGGCGGCGTGTCCATCGTGACGACCAAGGGCAACGCCTACGGTCACGTGGTGC TGCGTGGCGGCAATGGCAAGCCCAACTATGATTCGGTCAGCGTCGCGCTGTGCGAACAGGCGCTGAACAAGGCCAAGATCAAGCCAAACATCATGGTCGA CTGCAGCCACGCCAACTCCAACAAAGACCCGGCCTTGCAGCCATTGGTGATGGAGAACGTTGCCAACCAGATTCTGGAAGGTAACCAGTCGATCATCGGC TTGATGGTCGAGAGCCATTTGAACTGGGGTTGCCAGGCGATTCCAAAAGACTTGGCCGACTTGCAGTACGGCGTGTCGATCACCGATGCCTGTATCGATT GGTCCGCCACCGAAACTACCCTGCGCAGCATGCACGCCAAGCTCAAGGACGTGTTGCCCCAGCGCAAGCGCACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCCGTACCGGTTTCGCGCACACAAAAACGCCGGGCTAAGCCCGGCGTTTTTTATTGGCAACTGGTCAGTTACAGCTTCGCGGCATGGCGCTGGTGGCGC TCCATATAGCGTTCGACATAGGAGCACGACGGGATCACCGTGTAGCCAGCCTCTTCGGCAAACTTCAAGGCTTCCTCGGTCAACGCAGCCGCAATGCCTC GCCCCCGCAGTGCGTTGGGCACGAAGGTGCGATAGATATCCAGGGTCTGCTTCCCGAGGTCCATGTAGGTCAGGTAGGCACGATGACCGTCCACATTGGT CTCGAACTGATGACCAGCCTGGTCATGGTGGATGGACAACGCCTCGCTCATCACTACTCCTCGCGGGTCTGAATTAACGACCCTACCTTACCGATGTTTT TCCGGCGAAGGAACATCTACGCCACCCCGTGCCGGTTTCGACAGCGAGAAAACCGTGAGCGCTCACAACCAGCACATAGGGAATAGTAGGCACCAATCCT
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| Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPINDLNVESNETLITPDQLKREIPLSDAALQTVTKGREVIRDILDGTDHRLFVVIGPCSIHDLKAAHEYAERLKVLAAEVSDTLYLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRKLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGGLTVAINA LQSVSSPHRFLGINQEGGVSIVTTKGNAYGHVVLRGGNGKPNYDSVSVALCEQALNKAKIKPNIMVDCSHANSNKDPALQPLVMENVANQILEGNQSIIG LMVESHLNWGCQAIPKDLADLQYGVSITDACIDWSATETTLRSMHAKLKDVLPQRKRT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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