Pseudomonas sp. CF150, CF150_22973

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF150 soap_scaffs_150.Contig74, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGACCGCGAGCAATCGCCTATGTGCTGGTTTGCCGGGTACGACGGCGTGAAAACCAAGGCGTTCGTCGGCAAGTACTACCTCAGCGGCGATACCGTGGA GCTGAACCCGGACGGCAGCATCAGCTTTGTCGGACGCAGCGACGACGTGATCACTACATCCGGCTACCGCGTGGGCCCCTTCGACGTGGAAAGCGCGTTG GTCGAACACCCGGCGGTGGTCGAGGCTGCCGTGGTCGGCAAGCCTTGCCCGGAGCGCACTGAGCTGGTCAAAGCCTTTGTGGTGATCAGCGAGCAATACC GCGCCACCCCGGAGCTGGCTGAAGAGCTGCGCCTGCATGTGCGCCAGCGCCTGGCCGCCCATGCGTACCCGCGGGAAATCGAATTTGTCAGCGACTTGCC CAAGACCCCGAGCGGCAAGCTGCAACGCTTTATTTTGCGCAATCAGGAAATAGCCAAGGCCCAGGCGGCCGTGGCTTGACCCTTTTAAAAGGAAACAACG
DNA Sequence for Gene
>CF150_22973
ATGCAGATTGAAAACAAGGTATTCCTGGTCAGCGGCGGCGCGTCGGGCCTCGGCGCGGCCACGGCCGAAATGCTGGTCGCCGCGGGTGCCAGGGTGATGC TGGTGGACTTGAACGCCGACGCCGTGACTGCCAAGGCCAAGCAACTGGGCGACAATGCCCGCAGCGCCGTGGCGGACATCAGCCAGGAAGCCGCTGCAGA AGCGGCCGTGAAGGCGGCGGTCGAGGCCTTTGGGGGCTTGCACGGCCTGGTCAACTGCGCGGGTGTGGTGCGTGGCGAGAAGATCCTCGGCAAGAACGGC CCGCACGGCCTGGCGAGCTTTGCCCAAGTCATCAACGTCAACTTGATCGGCAGTTTCAACCTGCTGCGCCTGGCCGCTGCGGCGATCGCTGAAACCGAGG CGAATGCCGACGGCGAGCGGGGCATCATCATTAATACCGCCTCGGTGGCGGCATTCGATGGGCAGATCGGCCAGGCTGCGTACGCCGCGTCCAAGGGCGC GATCGCCAGCCTCACCTTGCCTGCCGCGCGGGAACTGGCGCGCTTTGGTATCCGGGTGATGACCATTGCACCCGGCATTTTCGAAACCCCGATGATGGCC GGCATGACCGACGAAGTCCGCAACTCCCTGGCTGCCGGCGTGCCGTTCCCGCCACGCCTGGGCAAACCCGCCGAATATGCCGCGCTGGTACGCCACATCA TTGAAAACAGCATGCTTAATGGTGAGGTGATCCGTCTCGACGGTGCCTTGCGCATGGCCGCCAAATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGCAATGGCTATGAACGATCCAATTGTTATTGTCAGCGCCGTGCGCACGCCCATGGGCGGGTTCCAGGGCGACCTCAAAAGCCTGACCGCGCCGCAACT GGGCGCAGCCGCCATTCGTGCGGCGGTCGAGCGTGCCGGTATCGCCACCGATGCCGTCGACGAAGTGCTGTTTGGCTGTGTACTGCCCGCCGGGCTTGGG CAAGCGCCTGCTCGCCAGGCTGCCTTGGGCGCCGGGCTGGACAAGGGCACGCGCTGCACCACCCTCAACAAAATGTGCGGTTCCGGCATGGAAGCGACGA TTCTGGCCCACGATTCGCTGCGCGCTGGCAGTGTCGATGTGGTGATCGCTGGCGGCATGGAAAGCATGTCCAACGCCCCGTACCTGCTGGACCGTGCGCG CAGCGGCTACCGCATGGGCCACGGCAAGGTGCTGGACCATATGTTCCTCGACGGCCTTGAAGATGCCTACGACAAGGGGCGCCTGATGGGAACCTTTGCC
Amino Acid Sequence
>putative short-chain dehydrogenase family protein
MQIENKVFLVSGGASGLGAATAEMLVAAGARVMLVDLNADAVTAKAKQLGDNARSAVADISQEAAAEAAVKAAVEAFGGLHGLVNCAGVVRGEKILGKNG PHGLASFAQVINVNLIGSFNLLRLAAAAIAETEANADGERGIIINTASVAAFDGQIGQAAYAASKGAIASLTLPAARELARFGIRVMTIAPGIFETPMMA GMTDEVRNSLAAGVPFPPRLGKPAEYAALVRHIIENSMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site